Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0319 ATGTCTTTTTCCCATGTTGACGGTAGAAGGCAGAGATCTGATATGGGGACCGAGAATGGCCAAGACGAAGCAAGCACATCAAAGAACGAAGCAGGAACAAGCTCAAATGAAGAAAATAGCAATCAAACAGAAAAGGCCGAGACAGTTCCGTTTCATAAGTTGTTCACATTTGCCGACTCTACAGATATATTGTTGATGGTTGTTGGCAGCATCGGGGCCATCGGAAACGGTGCGGGTCTTCCTCTTATGACGTTGCTGTTCGGCGAGATGATTGACTCATTCGGAAACAATCAGTATAGCGCTGACGTGGTCGATGAAATTTCCAAGGTTTCTCTGAAGTTTGTGTACTTGGCGGTAGGAATTGGAGTGGCAGCTTTTCTCCAGGTGGCTTGCTGGATGGTCACAGGGGAGAGACAGGCCGCGAGAATAAGAAGTTTGTATTTGAAAACAATACTAAGACAAGATGTGGCTTTCTTCGATATGGAAACAAACACTGGAGAGGTAGTCGGTAGAATGTCAGGTGACACTGTTCTTATACAAGACGCCATGGGTGAAAAGGTTGGAAAATTTCTGCAGCTAATATCAACATTCATTGTGGGTTACATAGTAGCATTTGTGAAAGGGTGGCTTCTCAGTCTTGTCATGTTATCCACTCTTCCACTTCTTGTGGTCTCTGGTGCGGCTATGGCCTTCATTATAGGCAGAATGGCATCGCAAGGCCAAACCGCTTATGGAAAAGCTGCAAACGTCGTTGAACAGACAATTGGCTCAATTAGAACGGTTGCATCCTTCACCGGAGAGAAGCAAGCAGTATCTGGTTACAGCAGGTTTCTTGTAGATGCATACAGAGCAGGAGTTCAGGAAGGTTTGGTAGCAGGAGCGGGTCTTGGTACAGTCATGTTCGTAATTTTCTGTGGCTATGCTTTGGCCACATGGTATGGCGCAAAGTTGATACTGGATAAAGGATATAACGGGGGTGATGTGATTACTGTGATCTTTTCCGTCTTAACTTCTTCCATGAATCTTGGTCAAGCAGCCCCTTGTTTGAGTGCTTTTGCGGCAGGCCAAGCTGCAGCTTATAAAATGTTCAAGGCTATTGAGAGAAAACCAGAGATAGATTCTTATGGTGAAAAAGGGAAAACATTAGAAGATGTTCAAGGGGAAATAGAGTTGAGGGAAGTTTATTTCAGTTACCCAGCTAGACCTGGGGAGCTGATTTTTGATGGGTTCTCTCTTAAAATACCAAGTGGCACTACTGCAGCTTTGGTTGGACAAAGTGGAAGTGGAAAGTCCACTGTCATCAGCTTAATAGAAAGATTTTATGATCCACGGGCAGGTGAAGTTCTTATAGATGGCATTAACTTGAAAGAATTCCAACTCAGATGGATTAGAGGAAAAATTGGGCTTGTCAGCCAAGAGCCAGTCCTTTTTGCATCTAGCATTAAGGATAACATTGCTTATGGAAAGGCGGGAGCAACAACTGAAGAGATAAAAGCAGCAGCTGAACTTGCAAATGCAGCTAAATTCATTGATAAATTACCGCAGGGATTGGACACAATGGTTGGTGATCATGGAACTCAGTTGTCTGGGGGACAGAAGCAGCGCATTGCCATTGCAAGAGCAATCCTCAAAAATCCAAAAATCCTACTTCTAGATGAAGCTACGAGTGCACTTGATGCAGAATCTGAAAGGATTGTGCAAGAGGCTTTAGACAGGATCATGGTAAACAGAACTACTGTTGTTGTGGCACACCGCTTAAGCACAGTGAAAAATGCCGATATGATTGCTGTGATTCACAGAGGAAAAATGGTTGAGAAAGGAACACACACAGAATTACTCAAGGATCCTGAAGGAGCATACTCTCAGCTTATACGCCTACAAGAAGTAAATAAGGAGTCAGGAGATAGTGTAGATGATGAAAACAAGCATGAACTTTCCTCAGATTCCTTAAGGCATTCTAGTCAGATAAGGTCATTAGGAAGATCCATAAGTCGAGGATCATCGGTGGGAAATAGCAGCCGCCACTCCTTTTCAGTTGCGTTTGGCTTGCCTACTGCAGTCAACACCACTGATCCTGAACTCGAAAATCCAGAAACTAAAGAACGATCACCAAAGGTTCCACTCCGCCGCCTTGCTTCCCTCAACAAGCCAGAGATCCCAGTGCTCCTGATCGGATCTTTAGCTGCCATTGTGAATGGTGCCGTGCTTCCTATATTTGGCATTTTGATTTCCAGTGCAATCAAATCGTTCTACGAGCCACCTGATGAAATGAAAAAGGATTCCAAGTTCTGGGCATTAATGTTTCTGATACTTGGTATTGCGTCTGTGGTGGCACTTCCTGCTCGAGGATACTTTTTCGCCGTTGCCGGATGTAAGTTAATCCAACGCATCAGGCAGATGTGCTTTGTGAAGGTAGTAAGGATGGAGATAGGCTGGTTTGATGATCCTGAGCATTCGAGTGGTGTAATTGGAGCAAGGCTCTCAGGAGACGCAGCAACTGTTCGTGCACTTGTTGGGGATGCTCTTGGACAACTGGTCGAGAATCTCGCATCATTACTGGCGGGTTTGATAATTGCTTTCATCGCAAGCTGGCAGTTAGCTTTTATTATTCTTGTATTGATTCCCCTGATTGGGGTAAACGGATACATTCAAGTGAAATTCATGAAAGGGTTCAGTGCAGATGCAAAGATGATGTACGAGGAAGCAAGTCAAGTTGCTACCGATGCAGTTGGAAGTATAAGAACAGTAGCTTCATTTTGTGCTGAAGAAAAGGTGATGGAACTATACAGAAAGAAATGTGAAGGGCCTATGAAATCAGGGATACATCAGGGCTTGATCAGCGGAACAGGATTTGGAGTATCGTTTTTCCTACTCTTCTCCGTCTATGCAACCAGCTTTTACGCGGGAGCTAAGCTTGTGGAGGACGGCAAAGCTACATTTCCAGATGTTTTTCGGGTTTTCTTTGCTTTGACCATGGCAGCTTTAGCCGTTTCCCAATCAAGCTCTTTTGCGCCTGATTCTAGCAAAGCCAAGTCAGCCGCAGCTTCTATATTTGGAATAATTGACAGGAAATCGGAGATAGATCCAAGCGACGAGTCAGGAGCCACATTGGATAGCGTGAAGGGAGAAATTGAGCTTCGTCATGTTAGCTTCAAGTATCCATCAAGGCCAGATATACAGATTTTCCGAGACCTTAGCTTGGCCATACATTCTGGAAAGACGGTGGCCCTTGTAGGTGAAAGTGGAAGCGGAAAATCTACGGTGATTTCATTATTGCAAAGATTTTACGATCCTGATTCAGGTTCAATTACACTCGATGGAATAGAGATTCAAAAGTTGCAACTTAAATGGTTAAGGCAACAAATGGGTCTTGTGAGCCAAGAGCCAATATTGTTCAATGACACTATCCGTGCCAATGTTGCCTATGGAAAGGGAGGCGATGCAACTGAAGGAGAAATCATAGCTGCAACCGAACTGGCCAATGCTCATAAGTTCATTAGCGGGTTACAACAAGGGTATGATACAGTAGTGGGAGAAAGGGGAATCCAACTATCAGGTGGGCAAAAGCAGAGAGTAGCAATTGCACGTGCCATAATTAAAAGTCCAAGGATTTTGTTATTAGATGAAGCAACGAGTGCTTTGGACGCTGAGTCAGAGAGGGTGGTTCAGGATGCATTGGATAGAGTGATGGTGAATAGAACTACGGTGGTTGTGGCCCATCGTTTATCTACGATAAAAAATGCAGATGTTATTGCAGTGGTTAAAAACGGAATCATAGTTGAGAAAGGAAGGCACGAGACCTTGATTAACATCAAGGATGGATTCTATGCTTCTTTAGTCCAACTTCACGCGAGCGCTTCTACATCATGA 3870 0.4419 MSFSHVDGRRQRSDMGTENGQDEASTSKNEAGTSSNEENSNQTEKAETVPFHKLFTFADSTDILLMVVGSIGAIGNGAGLPLMTLLFGEMIDSFGNNQYSADVVDEISKVSLKFVYLAVGIGVAAFLQVACWMVTGERQAARIRSLYLKTILRQDVAFFDMETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLISTFIVGYIVAFVKGWLLSLVMLSTLPLLVVSGAAMAFIIGRMASQGQTAYGKAANVVEQTIGSIRTVASFTGEKQAVSGYSRFLVDAYRAGVQEGLVAGAGLGTVMFVIFCGYALATWYGAKLILDKGYNGGDVITVIFSVLTSSMNLGQAAPCLSAFAAGQAAAYKMFKAIERKPEIDSYGEKGKTLEDVQGEIELREVYFSYPARPGELIFDGFSLKIPSGTTAALVGQSGSGKSTVISLIERFYDPRAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKAGATTEEIKAAAELANAAKFIDKLPQGLDTMVGDHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALDRIMVNRTTVVVAHRLSTVKNADMIAVIHRGKMVEKGTHTELLKDPEGAYSQLIRLQEVNKESGDSVDDENKHELSSDSLRHSSQIRSLGRSISRGSSVGNSSRHSFSVAFGLPTAVNTTDPELENPETKERSPKVPLRRLASLNKPEIPVLLIGSLAAIVNGAVLPIFGILISSAIKSFYEPPDEMKKDSKFWALMFLILGIASVVALPARGYFFAVAGCKLIQRIRQMCFVKVVRMEIGWFDDPEHSSGVIGARLSGDAATVRALVGDALGQLVENLASLLAGLIIAFIASWQLAFIILVLIPLIGVNGYIQVKFMKGFSADAKMMYEEASQVATDAVGSIRTVASFCAEEKVMELYRKKCEGPMKSGIHQGLISGTGFGVSFFLLFSVYATSFYAGAKLVEDGKATFPDVFRVFFALTMAALAVSQSSSFAPDSSKAKSAAASIFGIIDRKSEIDPSDESGATLDSVKGEIELRHVSFKYPSRPDIQIFRDLSLAIHSGKTVALVGESGSGKSTVISLLQRFYDPDSGSITLDGIEIQKLQLKWLRQQMGLVSQEPILFNDTIRANVAYGKGGDATEGEIIAATELANAHKFISGLQQGYDTVVGERGIQLSGGQKQRVAIARAIIKSPRILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGIIVEKGRHETLINIKDGFYASLVQLHASASTS 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0319 1289 MobiDBLite consensus disorder prediction 1 45 - -
Lele07g0319 1289 Pfam ABC transporter 1063 1212 IPR003439 GO:0005524
Lele07g0319 1289 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1044 1281 IPR003439 GO:0005524
Lele07g0319 1289 MobiDBLite consensus disorder prediction 631 672 - -
Lele07g0319 1289 Gene3D ABC transporter type 1, transmembrane domain 112 1018 IPR036640 GO:0005524|GO:0016020
Lele07g0319 1289 SUPERFAMILY ABC transporter transmembrane region 704 1029 IPR036640 GO:0005524|GO:0016020
Lele07g0319 1289 MobiDBLite consensus disorder prediction 18 45 - -
Lele07g0319 1289 CDD ABC_6TM_Pgp_ABCB1_D1_like 66 350 - -
Lele07g0319 1289 ProSitePatterns ABC transporters family signature. 528 542 IPR017871 GO:0005524|GO:0016887
Lele07g0319 1289 FunFam ABC transporter B family member 9 53 386 - -
Lele07g0319 1289 FunFam ABC transporter B family member 1 379 628 - -
Lele07g0319 1289 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 67 354 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g0319 1289 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 723 1009 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g0319 1289 SMART AAA_5 416 588 IPR003593 -
Lele07g0319 1289 SMART AAA_5 1071 1264 IPR003593 -
Lele07g0319 1289 MobiDBLite consensus disorder prediction 651 672 - -
Lele07g0319 1289 CDD ABC_MTABC3_MDL1_MDL2 1044 1282 - -
Lele07g0319 1289 Pfam ABC transporter transmembrane region 722 994 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g0319 1289 Pfam ABC transporter transmembrane region 69 340 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele07g0319 1289 Pfam ABC transporter 408 556 IPR003439 GO:0005524
Lele07g0319 1289 CDD ABC_MTABC3_MDL1_MDL2 389 627 - -
Lele07g0319 1289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1035 1282 IPR027417 -
Lele07g0319 1289 MobiDBLite consensus disorder prediction 631 650 - -
Lele07g0319 1289 PANTHER ABC TRANSPORTER B FAMILY 29 630 - -
Lele07g0319 1289 Gene3D - 1034 1288 IPR027417 -
Lele07g0319 1289 FunFam ABC transporter B family member 1 1034 1284 - -
Lele07g0319 1289 FunFam ABC transporter B family member 9 1011 1033 - -
Lele07g0319 1289 CDD ABC_6TM_Pgp_ABCB1_D2_like 712 1027 - -
Lele07g0319 1289 SUPERFAMILY ABC transporter transmembrane region 52 371 IPR036640 GO:0005524|GO:0016020
Lele07g0319 1289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 380 627 IPR027417 -
Lele07g0319 1289 FunFam ABC transporter B family member 1 702 1010 - -
Lele07g0319 1289 Gene3D - 387 644 IPR027417 -
Lele07g0319 1289 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 389 625 IPR003439 GO:0005524
Lele07g0319 1289 ProSitePatterns ABC transporters family signature. 1184 1198 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0319 Lele-ChrLele07 1772484 1778656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0319 42 1283 Calmodulin-binding Proteins AT2G36910 45.040 0.0 1077