Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0312 ATGGAAAATCAACAACAGCAACGCCTTGAATTGACCTCCCCTAGCTCCGGCGACTTTCTCCGCCAGAATTTAGATCCAATAAACGACGACCCCATCGATCGTCCTATCATCAAAGAAATGGATTTCTTCTCTTGTGCTTCACCTGGTAAATCTTTTGAGACTAGAAATCAGCAGCACCAAGATCCTGACTACAGGATCAATCACGATGGATCATCAAGTGCTCTCTCACCGGATCGCCCCGTCAACACTAGACTGAATTTGAACTGTGCAAGTCCTGGAATGCCAAGATTCGAAAACGATCAGGAGAAGCTCGATACTGAACTGATTACACTTCAAGGCGAATTGCGGAGGCTGCATGAAGAGAATCAGAAGTTGAAAACTATGCTGGAACAGATCACGAAAAGCTATAACCAACTGCAGGCATATCTCTTTATCGCTTTGAATAAAGAAAAGGCTCAGAATGTTGAAGCAAATGGGATGTTGTCTGGGCAACGAAAATTGGACCCACGGCGGTCTACCAAATTAGACGCGAATAATTTTGGTTCAGACGACAAGACTCAAGAGCTTTCAGTTTCTCCATCAAACAATGCGGAGGTCATGTCAAGGCAACGTGACCAACACCACCAATCACCTAAACTTCTAGGAAAGCAAGCAGCTTGCCTTGAAACTATTTCCAACCCAGAAGATCTCAAAAGCCAAGAACCAAAGCCGGATATTCATTTCAGAAAAGCCAGGGTTTCTGTACTTGCAAGATCAGAAGCTCTTCTGATTAACGATGGATGTCAATGGAGGAAATATGGTCAAAAAATGGCCAAGGGTAACCCTTGCCCTCGCGCCTACTATCGCTGTACTTTGGCCGTTGGATGCCCCGTTCGTAAGCAGGTGCAAAGATGTGCTGAAGACAAGACGGTGCTCATAACCACGTACGAAGGGAATCACAACCACCCTCTCCCACCGGCGGCCACCTCCATGGCAAATACGACATCGGCAGCAGCAGCGATGCTTCTATCAGGTTCAACTATGAACAATGAAGCCTTAGTAAATTCAGGTGGAGGGTACTTGTCGTCTATGCCTTACTCTTCAATGGCAACCCTATCAGCCTCTGCACCGTTTCCTACTATCACTCTGGACTTGACTCAGACCCCTAAAAGCGTGCAGCTTCACCAGCCACCGTCCCATGGGGTTACGTTTCCTCTGCCATTGCAAGGTCACCCACTGCACGGTCATCAGAAGCCACCGTTAGGGCAGCAACAGCAGCCTTCTATGGTTGAGACGATGAGTGCAGCTATTGCCTCTGATCCGAACTTCACAGCGGCGCTGGCGGCGGCGATTTCTTCTGTCTTTGGGAGTAATTTGAATAGCGACGGTGGGAGTGGAAGTGGAAATGCTATTCCCCTTAACGGGATTTCTGCGCCATCTCTGCTTCCTCCGTCCTGCACTACATTCTCCACGAACTAG 1458 0.4808 MENQQQQRLELTSPSSGDFLRQNLDPINDDPIDRPIIKEMDFFSCASPGKSFETRNQQHQDPDYRINHDGSSSALSPDRPVNTRLNLNCASPGMPRFENDQEKLDTELITLQGELRRLHEENQKLKTMLEQITKSYNQLQAYLFIALNKEKAQNVEANGMLSGQRKLDPRRSTKLDANNFGSDDKTQELSVSPSNNAEVMSRQRDQHHQSPKLLGKQAACLETISNPEDLKSQEPKPDIHFRKARVSVLARSEALLINDGCQWRKYGQKMAKGNPCPRAYYRCTLAVGCPVRKQVQRCAEDKTVLITTYEGNHNHPLPPAATSMANTTSAAAAMLLSGSTMNNEALVNSGGGYLSSMPYSSMATLSASAPFPTITLDLTQTPKSVQLHQPPSHGVTFPLPLQGHPLHGHQKPPLGQQQQPSMVETMSAAIASDPNFTAALAAAISSVFGSNLNSDGGSGSGNAIPLNGISAPSLLPPSCTTFSTN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0312 485 MobiDBLite consensus disorder prediction 175 200 - -
Lele07g0312 485 Coils Coil 101 135 - -
Lele07g0312 485 ProSiteProfiles WRKY domain profile. 252 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g0312 485 MobiDBLite consensus disorder prediction 1 22 - -
Lele07g0312 485 MobiDBLite consensus disorder prediction 160 213 - -
Lele07g0312 485 MobiDBLite consensus disorder prediction 48 81 - -
Lele07g0312 485 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 98 455 IPR044810 GO:0003700
Lele07g0312 485 FunFam probable WRKY transcription factor 31 242 319 - -
Lele07g0312 485 SUPERFAMILY WRKY DNA-binding domain 251 318 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele07g0312 485 Pfam WRKY DNA -binding domain 258 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g0312 485 MobiDBLite consensus disorder prediction 67 81 - -
Lele07g0312 485 SMART WRKY_cls 257 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g0312 485 MobiDBLite consensus disorder prediction 1 31 - -
Lele07g0312 485 Gene3D WRKY domain 242 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0312 Lele-ChrLele07 1721290 1723773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0312 1 485 WRKY Transcription Factor Family AT4G01720 39.887 4.35e-82 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele07g0312 WRKY 5.1e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0294 05 1657328 1659839 Lele07g0312 07 1721290 1723773 hybridization
Lele06g0109 06 680912 683408 Lele07g0312 07 1721290 1723773 hybridization