Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0311 ATGGACACTAGCGCGTCTACTTTTGACCTGGAAGGCGTGGTTCACTCTTTTCGACCGTGTCTTGATGTGTTAGTCATGTCCAATTCCTCTAAAGAAGTAAATATGGCATCCTCTTTCTTCTTCTTCATCTTCTCAACCTTAATCTGTTATCCCTACTTTGCATCCTTGGGAGCCGAGGCTCGTCATGATCCCTGTTCTGTTTCATCTCTCATGAGCAAAAAGCTCTTTAAAACCATCTTCCCTCACAAAGATGACTCAGCATGCCCTGCCAAGAACTTCTACACTTACAAGTCTTTCATTCACGCGGTTAAACACTTCCCTGAATTTGGCACCACCGGAAATATAACCACGCGAAAGCTTGAGATCGCTGCCTTCCTTGCTCAGATCTCCCACGAGACCACCGGTGGGTGGGCCACTGCCCCTGATGGACCCTTTGCCTGGGGCTTGTGTTTCAAGGAAGAACTCAAACCTCAGAGTAATTACTGTGACTCCAACAACACTCAATGGCCTTGTTACCCTGGCAAAAGTTACTTTGGCAGAGGACCCATTCAACTCTCTTGGAACTTTAACTATGGGCCAGCGGGGAAGGCTTTGGGATTTGATGGGTTGAGGAATCCTGAGATCGTATCGAACAATTCTGAGATTGCGTTTAAAACGGCTCTGTGGTTTTGGATGACCGAACGAGAGCCGGTACCTTCTCCCCACAACGTGATGGTTGGGAAATATGTGCCGACAAAAGCTGATATAGCGGCTAATCGTACGGCTGGGTATGGGTTAGTGACCAACATAATCAACGGCAGACTGGAGTGTGGAATCCCTAACGACGCCAGAGTGAAGGATCGGATTGGGTTCTTCCAAAGATATGCCAAATTGTTTAACGTAGACACGGGGCCTAATTTGGATTGCGCTCATCAGAAATCATTTTAA 927 0.4714 MDTSASTFDLEGVVHSFRPCLDVLVMSNSSKEVNMASSFFFFIFSTLICYPYFASLGAEARHDPCSVSSLMSKKLFKTIFPHKDDSACPAKNFYTYKSFIHAVKHFPEFGTTGNITTRKLEIAAFLAQISHETTGGWATAPDGPFAWGLCFKEELKPQSNYCDSNNTQWPCYPGKSYFGRGPIQLSWNFNYGPAGKALGFDGLRNPEIVSNNSEIAFKTALWFWMTEREPVPSPHNVMVGKYVPTKADIAANRTAGYGLVTNIINGRLECGIPNDARVKDRIGFFQRYAKLFNVDTGPNLDCAHQKSF 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0311 308 FunFam Endochitinase (Chitinase) 153 211 - -
Lele07g0311 308 Gene3D Endochitinase, domain 2 153 211 - -
Lele07g0311 308 PANTHER CHITINASE-RELATED 55 306 - -
Lele07g0311 308 CDD chitinase_GH19 72 302 - -
Lele07g0311 308 SUPERFAMILY Lysozyme-like 66 308 IPR023346 -
Lele07g0311 308 ProSitePatterns Chitinases family 19 signature 1. 88 110 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lele07g0311 308 ProSitePatterns Chitinases family 19 signature 2. 215 225 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lele07g0311 308 Gene3D - 74 308 - -
Lele07g0311 308 Pfam Chitinase class I 71 302 IPR000726 GO:0004568|GO:0006032|GO:0016998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0311 Lele-ChrLele07 1713794 1716951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0311 33 308 Glycoside Hydrolase AT1G02360 64.493 2.72e-138 392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0311 07 1713794 1716951 Lele14g2101 14 26639379 26640302 CCT
Lele07g0311 07 1713794 1716951 Lele16g0256 16 1420123 1421014 CCT
Lele05g0293 05 1650556 1651478 Lele07g0311 07 1713794 1716951 hybridization
Lele06g0108 06 673505 674928 Lele07g0311 07 1713794 1716951 hybridization