Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0300 ATGGCCTCTTCATTCTCAGCGCAGTTAGTGCCAAGTCAGAACTCACTCCCTCGTCTTTCTCACTTTCAGGGTAATTATAGCCAACATGTGTCGAAGGTTCGAAGGTCACGTATGATTTGTAGCAGTTCAAAATCACAGCTTGGCTGCACAAAAGCATTGGCATCAAAATCTCATTATGCCTCAACTTTTTCAGTCTCAAAACAATCCGGAGTAAAATCAATCTCATATAAGAGAATGGCATGTGTCAAGGCTGACCGAAGTGTTCTAGAGCTGCAAGACAAAGTGACCAACAAGTGTTTCTTTGATGTAGAAATTGGGGGTGAATCTGCTGGCAGGATTGTTATGGGCCTATTTGGAGGAGTTGTGCCCAAAACTGTTGAAAATTTCCGTGCTCTGTGTACAGGAGAGAAAGGATATGGTTACAAGGGATCCCACTTCCACCGTATAATCAAAGATTTCATGATTCAGGGAGGGGACTTCACTGAAGGAGATGGAACTGGAGGAATCAGCATCTATGGCTCTAGTTTTGAAGATGAGAGTTTTGCCTTGAAGCATGTTGGTCCTGGAGTTTTGAGCATGGCGAATGCAGGTCCTAATACTAATGGTAGTCAATTTTTCATTTGTACTGTAAAGACTCCATGGCTGGACAATCGTCATGTTGTTTTTGGGCATGTCGTCGATGGAATGGATGTCGTGAAGACGCTTGAATCCCAGGAGACAAGCAGGTATGATGGCCCTCGTAAGCCGTGCAGAATTGTTAATTGCGGAGAGCTGCCTCTAGAGGCTTGA 789 0.4436 MASSFSAQLVPSQNSLPRLSHFQGNYSQHVSKVRRSRMICSSSKSQLGCTKALASKSHYASTFSVSKQSGVKSISYKRMACVKADRSVLELQDKVTNKCFFDVEIGGESAGRIVMGLFGGVVPKTVENFRALCTGEKGYGYKGSHFHRIIKDFMIQGGDFTEGDGTGGISIYGSSFEDESFALKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVVDGMDVVKTLESQETSRYDGPRKPCRIVNCGELPLEA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0300 262 Gene3D - 87 262 IPR029000 -
Lele07g0300 262 FunFam Peptidyl-prolyl cis-trans isomerase 85 262 - -
Lele07g0300 262 SUPERFAMILY Cyclophilin-like 94 258 IPR029000 -
Lele07g0300 262 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 141 158 IPR020892 GO:0003755|GO:0006457
Lele07g0300 262 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 100 257 IPR002130 GO:0000413|GO:0003755
Lele07g0300 262 CDD cyclophilin_ABH_like 98 256 - -
Lele07g0300 262 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 101 256 IPR002130 GO:0000413|GO:0003755
Lele07g0300 262 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 98 258 - -
Lele07g0300 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 146 158 IPR002130 GO:0000413|GO:0003755
Lele07g0300 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 217 232 IPR002130 GO:0000413|GO:0003755
Lele07g0300 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 132 IPR002130 GO:0000413|GO:0003755
Lele07g0300 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 204 216 IPR002130 GO:0000413|GO:0003755
Lele07g0300 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 189 204 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0300 Lele-ChrLele07 1650562 1653052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0300 69 255 U-box Gene Family AT5G67530 38.220 7.65e-30 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0283 05 1594809 1597257 Lele07g0300 07 1650562 1653052 hybridization
Lele06g0101 06 622097 624910 Lele07g0300 07 1650562 1653052 hybridization