Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0296 ATGGAAAAGGTAGTACTGAGTGTTGTGGTATTGTTGGTGTGGTTATCCACCACACAGCTAAGAACAGCAGCCGGGGCCGGCTGGCTGCGAGCACATGCAACTTTCTATGGAGGAAGCGACGCCTCAGGCACAATGGGAGGTGCATGTGGCTATGGGAATCTATACACGGATGGTTATGGGACAAAAACGGCAGCATTAAGCACAGCTCTGCTCAACGACGGGCAGGCGTGCGGCGGATGCTATCAGATAGTGTGTGACGGAACACAAGCTCCACAGTGGTGCCTGAGAGGGAGTTACATCACAATCACCGCCACAAATTTCTGTCCTCCGAACTACGCTCTTCCCAGCGACAATGGAGGTTGGTGCAATCCTCCCAGACCTCATTTTGACATGTCTCAGCCTGCTTTTGAGACTATCGCCAAGTACCGCGCCGGAATTGTTCCCGTTTTCTTCCGACGGGTTGGGTGCAGTAGAAGTGGAGGCGTCAGGTTTACCATAAATGGGAGAGACTATTTTGAGCTTGTTCTTATTAGCAACGTGGGCGGTGCTGGCGAAATCTCACGAGTTTGGATCAAAGGATCCAAAATGGGTAACTGGGCGTCCATGTCCAGGAATTGGGGCAAGACGATAGAGGTGAAAATTATAAAGCAAAATATTCTCTTCACTTTCTGCTCTTCAAGGAGGAAGAAGAAAGGATGGAGGCCTGGCACGTGTTCCTTTCATGTTGGAAATTCAAATATTTCAAACTCAAGTGCAATTCACTGA 765 0.4941 MEKVVLSVVVLLVWLSTTQLRTAAGAGWLRAHATFYGGSDASGTMGGACGYGNLYTDGYGTKTAALSTALLNDGQACGGCYQIVCDGTQAPQWCLRGSYITITATNFCPPNYALPSDNGGWCNPPRPHFDMSQPAFETIAKYRAGIVPVFFRRVGCSRSGGVRFTINGRDYFELVLISNVGGAGEISRVWIKGSKMGNWASMSRNWGKTIEVKIIKQNILFTFCSSRRKKKGWRPGTCSFHVGNSNISNSSAIH 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0296 254 SUPERFAMILY Barwin-like endoglucanases 27 179 IPR036908 -
Lele07g0296 254 PRINTS Expansin signature 160 172 IPR002963 GO:0009664
Lele07g0296 254 PRINTS Expansin signature 119 136 IPR002963 GO:0009664
Lele07g0296 254 PRINTS Expansin signature 100 110 IPR002963 GO:0009664
Lele07g0296 254 PRINTS Expansin signature 87 98 IPR002963 GO:0009664
Lele07g0296 254 PRINTS Expansin signature 58 72 IPR002963 GO:0009664
Lele07g0296 254 PRINTS Expansin signature 136 149 IPR002963 GO:0009664
Lele07g0296 254 PRINTS Expansin signature 172 193 IPR002963 GO:0009664
Lele07g0296 254 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 171 212 IPR007117 -
Lele07g0296 254 Gene3D - 14 157 IPR036908 -
Lele07g0296 254 PANTHER EXPANSIN-A15 7 226 IPR002963 GO:0009664
Lele07g0296 254 Pfam Expansin C-terminal domain 162 228 IPR007117 -
Lele07g0296 254 Gene3D - 161 237 IPR036749 -
Lele07g0296 254 FunFam Expansin 18 157 - -
Lele07g0296 254 SUPERFAMILY PHL pollen allergen 158 229 IPR036749 -
Lele07g0296 254 Pfam Lytic transglycolase 63 150 IPR009009 -
Lele07g0296 254 SMART dpbb_1 63 151 IPR007112 -
Lele07g0296 254 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Lele07g0296 254 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Lele07g0296 254 PRINTS Expansin/Lol pI family signature 144 160 IPR007118 GO:0005576
Lele07g0296 254 PRINTS Expansin/Lol pI family signature 199 213 IPR007118 GO:0005576
Lele07g0296 254 PRINTS Expansin/Lol pI family signature 45 63 IPR007118 GO:0005576
Lele07g0296 254 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 161 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0296 Lele-ChrLele07 1628111 1630045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0296 5 211 Expansin Gene Family AT4G01630 71.635 2.56e-116 332