Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0282 ATGAATGGCTTGGAGAGAGCTTGGAAGAAAGGTGAGCTGTCATTATCCTCACAATTTTGGCTTCAAGCTGACGCACTGGCATTTTTCTTCCATTTTTTAATTTTTTTGTTGGATTTATGTGTGGGTTTGAGCGGGAGAATACATATGAACTTTGCCAGAGCTTTGACTGCAGTACCATCTAGGCGTGTTGCACGGTCATGTTCTTCATCTACATTTGTAGCAAAATCTGTTTATGCATCAGCAGGGTGCTTGACTGAGCTTATCAGTCACTCATCTGCCAGAGCAGCTGGTTTTTGCAATGGAACAAAAGAACACGGAATACGATACCGGTGGTTTCATGCTAATCCAGAACTATGGGCGAGAAGAAATGAGGATTTGTTTGGTTTGAAGACTCCAAAGAAGGAGAAGCGTGTGAGAAGGGACACTAAAAATCAACCCCCTGTTGAAGCTCCATATGTTCCTCGTAATGTGGTCAAGTCTACCAAATCCATTCCTGATAAAACAATTGAAATATTTGAAGGCATGACCATTGCTGAGCTGGCAAAGCGTACTGGAAAGTCAGCATCTTCTCTGCAAGGTATTCTAGTAAATGTTGGGGAACAGGTTGAATCAGAGTTTGAGCCTCTCAGTGTCGATATTGCAGAACTTGTTGCAATGGAAGTGGGTGTCAATGTGAAGAGGCTACATTCTACTGAAGGTGCAGAGATTGCACCCCGGCCAGCAGTTGTAACGGTGATGGGTCATGTTGACCATGGTAAAACCTCCCTTCTCGATGCTTTGCGCCAAACATCAGTGGCAGCCAAGGAGGCTGGGGGTATAACTCAGCATCTAGGTGCCTTTGTGGTGGCCATGCCATCAGGAGCATCAATCACATTTCTGGACACACCTGGTCACGCTGCATTTAGTGCAATGCGGGCAAGAGGTGCTGCAGTTACAGACGTGGTGGTACTTGTTGTTGCTGCAGATGATGGTGTGATGCCTCAAACACTTGAAGCTATATCCCATGCAAAAGCAGCTAAGGTACCGATAGTAGTTGCAATAAATAAATGTGATAAACCAGGGGCAAATCCTGAAAGAGTAAAACTTCAGCTTGCATCAGAGGGTTTGTTGCTGGAAGAGATGGGTGGGGATGTTCAGGTGGTTGAAGTTTCTGCAACTATGAAAACTGGACTGGATAACTTGGAGGAAGCTTTGCTCCTTCAGGCTGAAATGATGGATCTAAAAGCTCAAATTGATGGCCCTGCTCAAGCTTATGTGGTAGAAGCAAGGCTTGATAAAGGACGAGGTCCTTTAGTTACTGCTATTGTGAAGGCAGGGACTCTAGTTTGTGGTCAGTATGTGGTTATAGGCTCAGAATGGGGCAAAATAAGGGCTATTAGAGAAGTGACGGGTAAGTTGACTGACAGAGCAACACCTGCAATGCCTGTTGAGATTGAAGGGCTTCGGGGGACTCCCATGGCTGGTGATGATGTTATTGTTGTTCAATCAGAGGAGCGAGCACGATTGCTTAGTGCTGGTAGGAAAAGGAAATATGAGGAGGATAGGCTTAAAAAAATGGTCCAGGAAAAGACTAATTGTATGGAGTCACCGGAGGATGGTCCTCAGAGGGTTGAATTGCCAATAGTAGTGAAAGCTGATGTCCAGGGCACTGTTCAGGCTGTCACAGATGCGTTGAGAACTTTAAATAGTTCCCAGGTTTTCGTGAACGTTGTCCATGTTGGTGTAGGGTCTATTTCTCAATCTGATGTGGACCTAGCACAGGCTTGCGGTGCATGCATAGTTGGATTCAATGTGAAGAGTCCACCTAGTCCCGTTAGTCAGGCAGCAGGCCGTGCCAATATAAAGATAGTGCTACACCGTGTGATTTACCATCTCTTGGAGGAGATAGGCAATTTGATAATAGAGAAGGCTCCAGGGACGTCTGAAACCCAGGTAGCCGGGGAGGCAGAGGTGCTGAGTATATTTGAGCTTAAAGGAAGGAGCAAGTCCAAGGGGCCCGATGTCAAGATAGCCGGGTGTCGGGTTATCGATGGTTGCGTGATGAAATCGGGAACCATGAGGCTTCTGAGGAGTGGGGAAGTGATGTTTGAAGGAAACTGTGCGTCTCTGAGAAGGGAAACGCAGGACGTGGAGGCAGTGAAGAAGGGAAGTGAGTGTGGACTGGTAATAAGTGAGTGGCAAGATTTCCAGGTTGGAGATGTCATACAGTGCTTGGAACAAGTGGTCAGGAAGCCCAAGTTCATTAAGTCGCAGAGTGGAGCTGTTCGAATTGAGTGTTGA 2280 0.464 MNGLERAWKKGELSLSSQFWLQADALAFFFHFLIFLLDLCVGLSGRIHMNFARALTAVPSRRVARSCSSSTFVAKSVYASAGCLTELISHSSARAAGFCNGTKEHGIRYRWFHANPELWARRNEDLFGLKTPKKEKRVRRDTKNQPPVEAPYVPRNVVKSTKSIPDKTIEIFEGMTIAELAKRTGKSASSLQGILVNVGEQVESEFEPLSVDIAELVAMEVGVNVKRLHSTEGAEIAPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVAMPSGASITFLDTPGHAAFSAMRARGAAVTDVVVLVVAADDGVMPQTLEAISHAKAAKVPIVVAINKCDKPGANPERVKLQLASEGLLLEEMGGDVQVVEVSATMKTGLDNLEEALLLQAEMMDLKAQIDGPAQAYVVEARLDKGRGPLVTAIVKAGTLVCGQYVVIGSEWGKIRAIREVTGKLTDRATPAMPVEIEGLRGTPMAGDDVIVVQSEERARLLSAGRKRKYEEDRLKKMVQEKTNCMESPEDGPQRVELPIVVKADVQGTVQAVTDALRTLNSSQVFVNVVHVGVGSISQSDVDLAQACGACIVGFNVKSPPSPVSQAAGRANIKIVLHRVIYHLLEEIGNLIIEKAPGTSETQVAGEAEVLSIFELKGRSKSKGPDVKIAGCRVIDGCVMKSGTMRLLRSGEVMFEGNCASLRRETQDVEAVKKGSECGLVISEWQDFQVGDVIQCLEQVVRKPKFIKSQSGAVRIEC 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0282 759 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 149 754 IPR015760 -
Lele07g0282 759 FunFam Translation initiation factor IF-2 534 641 - -
Lele07g0282 759 Gene3D - 535 639 IPR036925 -
Lele07g0282 759 Gene3D Translation factors 641 744 - -
Lele07g0282 759 FunFam Translation initiation factor IF-2 642 746 - -
Lele07g0282 759 Pfam Translation-initiation factor 2 521 629 IPR023115 -
Lele07g0282 759 Gene3D - 236 410 IPR027417 -
Lele07g0282 759 TIGRFAM small_GTP: small GTP-binding protein domain 241 393 IPR005225 GO:0005525
Lele07g0282 759 Pfam Elongation factor Tu GTP binding domain 243 399 IPR000795 GO:0003924|GO:0005525
Lele07g0282 759 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 238 408 IPR000795 GO:0003924|GO:0005525
Lele07g0282 759 FunFam Translation initiation factor IF-2 235 410 - -
Lele07g0282 759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 239 429 IPR027417 -
Lele07g0282 759 CDD mtIF2_IVc 647 737 - -
Lele07g0282 759 SUPERFAMILY Translation proteins 412 494 IPR009000 -
Lele07g0282 759 TIGRFAM IF-2: translation initiation factor IF-2 166 742 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lele07g0282 759 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 531 646 IPR036925 -
Lele07g0282 759 SUPERFAMILY Translation proteins 642 744 IPR009000 -
Lele07g0282 759 CDD IF2_mtIF2_II 414 509 IPR044145 -
Lele07g0282 759 CDD IF2_eIF5B 242 405 - -
Lele07g0282 759 Hamap Translation initiation factor IF-2 [infB]. 44 745 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lele07g0282 759 Gene3D Translation factors 411 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0282 Lele-ChrLele07 1542204 1545745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0282 239 723 Eukaryotic Initiation Factors Gene Family AT1G21160 27.648 3.24e-27 116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0265 05 1491519 1495049 Lele07g0282 07 1542204 1545745 hybridization
Lele06g0084 06 531714 536311 Lele07g0282 07 1542204 1545745 hybridization