Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0272 ATGCGGATTTACTTCATCTGTGAAGGTTGCCAATACGGGGCGTTTCCTGCGAGCAACGAATTCGCACTTGTGGAGTGCACATGGGAAGACACTCTTGTTGTTACAAGCAGAAACTCAGGAAAGGCCTCTGGCTTGCAGAGGTGTGGCAAGAGCTGCAGGTTGAGGTGGATAAATTACCTGAGGCCTGATTTGAAAAGAGGAGCATTCTCGCAGCAGGAAGAGGATTTGATAATCGAACTCCATGCAGTCCTCGGCAACAGGTGGTCACAGATTGCAGCTCAGTTACCAGGAAGAACTGACAATGAGATTAAAAACCTATGGAATTCGTGCCTCAAGAAGAGGCTCAGGCAAAGAGGCATTGACCCCAACACCCACAAGCCGCTCTCTGAGGTTGAGAACGACAAGGACAAGCCCCCCTCGACCGACAAAAGCCATCACAGAGAACTGAGTGCAGCAGAGCCTGCAAAACCAAAGCCAAATGCAATGCCACTTGAAGTTTCTTCCGCCTCCAAGATCAGCAATTTGACCAGCAGCCGACCCACCCAGGATTTGTTCCTTGATAGCTCCATTACCAGTTGTGGTCCTTCTGATATGATGGGTTACTTCTCTTTTCAGCACTTGAACTATCCACCCTATGTTGGCCTCTCCGCAAATCCCAACGCCTCTCTTTGCTTCATGTCAGGTTCCAGATCCTCTCAGGTGATGTCAGACCGCAATTCTAGTATGACTCCCGCCATGCTCAATTCTGTGCCAAGCTCAATTTTCGCGACAACACATGTAAGTAGCACAGTTAGTCTCCAGTCTGATAATCCTTCCATATCCTCTGGCGATATTGATGGAGTTCAGAACTGGGAAGCTAGTATCCTTGCTAACAACGCAAGCAAAAGCAATGACCGCAGTGCTAGTATCCAATTGAAAAGCAGCAATAACTTCCTTGAGAACAACAGTTTATCATGGGGATTGGCAGACTCTGTGAAGGCCGATAAAGATGTTCAAGTACCCCTACAAGCAGAACAAGAAGACATTAAATGGTCTGAGTATCTGAATACACCATTTTTTCTAGGAAACGCAGCACAGAATCAAAACTTTCAATCTATTTACAGTGAGGTTAAACCGGAGACAGGCTTCATAGCTGATGAATCGAGTAACAGTTGGCACCACACCCAGCATCCGTCCGTTTTTCAAGCTTCAGACATCTACACCAAGGATCTGCGAAGATTCTCAGTGGCTTTTGGACAAACCCTGTAG 1248 0.4704 MRIYFICEGCQYGAFPASNEFALVECTWEDTLVVTSRNSGKASGLQRCGKSCRLRWINYLRPDLKRGAFSQQEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKRLRQRGIDPNTHKPLSEVENDKDKPPSTDKSHHRELSAAEPAKPKPNAMPLEVSSASKISNLTSSRPTQDLFLDSSITSCGPSDMMGYFSFQHLNYPPYVGLSANPNASLCFMSGSRSSQVMSDRNSSMTPAMLNSVPSSIFATTHVSSTVSLQSDNPSISSGDIDGVQNWEASILANNASKSNDRSASIQLKSSNNFLENNSLSWGLADSVKADKDVQVPLQAEQEDIKWSEYLNTPFFLGNAAQNQNFQSIYSEVKPETGFIADESSNSWHHTQHPSVFQASDIYTKDLRRFSVAFGQTL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0272 415 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Lele07g0272 415 Gene3D - 28 65 - -
Lele07g0272 415 Gene3D - 67 144 - -
Lele07g0272 415 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Lele07g0272 415 SUPERFAMILY Homeodomain-like 47 120 IPR009057 -
Lele07g0272 415 MobiDBLite consensus disorder prediction 118 153 - -
Lele07g0272 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Lele07g0272 415 MobiDBLite consensus disorder prediction 118 164 - -
Lele07g0272 415 CDD SANT 68 108 IPR001005 -
Lele07g0272 415 PANTHER MYB DOMAIN PROTEIN 55 41 323 - -
Lele07g0272 415 SMART sant 65 113 IPR001005 -
Lele07g0272 415 FunFam MYB transcription factor 67 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0272 Lele-ChrLele07 1492982 1495013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0272 41 415 MYB Transcription Factor Family AT1G09540 44.186 3.76e-86 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele07g0272 Myb_DNA-binding 3.6e-12 CL0123