Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0271 ATGGCAAGGTCTTCTCCTCTAACTACCCAGACCCTGACGTCGTCATCTGTCACAACCTCTCCAGTCCAGCGCAAGGCTCTCCTGTCTGTGTTCTCCGGTGCTTCCGAGTTATACGGAATGACTGAAGGGAAGTTTGATTCTAAAGAGAAAGACAACACATGTGCAACCGATCAATCTTCCGCACCTGCTGCCATTGAAGTTGAGGAAGAATCAGTGGGCATTAAAAAGGCAACTCCTGTACGATGTACAAGTTCTAAGAGAAGTCGTGCAGCTGAAGTGCATAATCTATCTGAAAGGAGGCGAAGAGACAGGATCAATGAGAAGATGCGCGCATTACAAGAACTCATCCCAAATTGCAATAAGGTGGATAAAGCATCGATGCTGGATGAGGCAATTGAGTATCTTAAAACACTTCAACTCCAAGTTCAAATTATGTCAATGGGAGCTGGTTTATATGCGCCTCCAAATCCTATGATGTTACTCCCAGGAATGCAGCACATGCAGACACCACGTATGGCTTCATTCTCACCCATAGGAATTGGCATGCAAATGGGGTTGGGAATGGGTTATGGGTTGAGCATGTCTGACATGAATAGTGGATCCCCTAGATTCCCAATGGTTCAGATGCCCCAAATGCAAGGAACTCATTTCCCTGATTTACCTATGCCTGGACCCACAGCTGCTTTACATGGGATGCCGAGATCAGGTCCTCAAGCATTCGGGTTTCCTGGTTGGGGACTTTACATGCCAATGCCAAATGCTCCTGGAGTTTCCATGCCAGGAGGGCTTCTAATGCACCCTTCGAGTTCAGGACAAAACGCCTTTGGAGCTGCAGGACTTGGGGAAACTCTGGATTTGGCTTCAGCCTCTAGTTTAAAGGATCCAATGCCAAATGTGAATTCACAAGTTATGCCAAGCAAAGGTGGCAGTAACTCCACAGTGCAGATGTCTACTCAGTGTGAAGCAACGAATGTTGGAATTGATCAGACAGCACTAGTGCATACTAGCGGGCATACCTCCAATATTAATGACAGCGGAGCTACTAATCCTGGCAAAGAAGATAACCCTGTGATTGGTAAATCTCGTATCATTAAGCACAAATACACATTCACATCTAGATCTAGTAATGACTGA 1134 0.4603 MARSSPLTTQTLTSSSVTTSPVQRKALLSVFSGASELYGMTEGKFDSKEKDNTCATDQSSAPAAIEVEEESVGIKKATPVRCTSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYAPPNPMMLLPGMQHMQTPRMASFSPIGIGMQMGLGMGYGLSMSDMNSGSPRFPMVQMPQMQGTHFPDLPMPGPTAALHGMPRSGPQAFGFPGWGLYMPMPNAPGVSMPGGLLMHPSSSGQNAFGAAGLGETLDLASASSLKDPMPNVNSQVMPSKGGSNSTVQMSTQCEATNVGIDQTALVHTSGHTSNINDSGATNPGKEDNPVIGKSRIIKHKYTFTSRSSND 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0271 377 FunFam Basic helix-loop-helix transcription factor 84 147 - -
Lele07g0271 377 Pfam Helix-loop-helix DNA-binding domain 93 139 IPR011598 GO:0046983
Lele07g0271 377 CDD bHLH_AtPIF_like 89 151 - -
Lele07g0271 377 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 89 138 IPR011598 GO:0046983
Lele07g0271 377 Gene3D - 84 147 IPR036638 GO:0046983
Lele07g0271 377 PANTHER TRANSCRIPTION FACTOR PIF3 46 317 IPR044273 GO:0003700|GO:0006355
Lele07g0271 377 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 86 151 IPR036638 GO:0046983
Lele07g0271 377 SMART finulus 95 144 IPR011598 GO:0046983
Lele07g0271 377 MobiDBLite consensus disorder prediction 338 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0271 Lele-ChrLele07 1474634 1481395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0271 66 166 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 77.670 3.28e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele07g0271 HLH 3.3e-14 No_clan