Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0255 ATGGGCGGAGGTGGAGCGACGCCGAACGCGGAGGCACAGTACTCGTCGGCGAAGATTTCTGTGTGGTGGGACATCGAGAACTGCCATGTCCCCAAGGGATGCGATCCGCACGCGATCGCCCAGAACATCAGCTCGGCACTGGTTCAGATGAATTATTGTGGGCCCGTTTCCATCTCCGCCTACGGCGATACTACTCGCATCACCGCTTCTGTACAGCACGCTCTCTCCAGTACCGGAATCTCCCTCAACCATGTCCCGGCTGGTGTCAAAGACGCTAGCGATAAAAAGATTCTTGTTGATATGCTGTTCTGGGCTGTGGATAATCCTGCACCTGCTAATTATCTATTAATTTCTGGTGATCGAGACTTCTCTAACGCACTGCATCAATTGCGAATGAGGAGATATAATATCCTTCTTGCACAGCCTCAGAAAGCATCTGCACCCCTAGTTGCAGCTGCCAAGAGTGTTTGGCTCTGGACTAGTCTCTTAGCTGGAGGACCTCCTCTAACAAATGGTGAATCACAACAATTTGGTAATAATAGCAACTTATCGAGTTCTGACACCTTACAAATCCCGGTCTCTAGTTCTGTTCAGACAAAGCAGCAAAGGGATTCCTTTGCTGAAGTTCATGTAGGAAATCATAATCATAAATTTCCAAATGCTGGAAGGGGATTAGATTCTAGATACCAGGGTAAAACAACTTGGAGAAGCCCTAGTCAACCAAATGGACCCAGACCATTGAACAAACCAGTTGGACTTCAAGAAAATCATAGCAGTATAAACTCTTACCGACCTGGCAACTCCAGCCCAAATGTTCCCCCAAATGGATGTGCTCCAAATTTTGTGCATCGCAGTACAGGTCAGTTATGGAGCAATAGCAGCAATCTACCAGGCAATAGCCAAATGCCTCATTCACAGCCATTAAGACCCAACAGTTATCCAATGCAACCTCCTTTTGCACCTAACAATCAATATCCAACAAATACCCATTCTTTTGCAACTCCAGCAGTGCCTCCTAGACCTGGTGGACCCAACTTCACTTCTGGACCACTCACAAATGTGCCAGATATAGGTAATCTGAACGTATCTGGATTGCCAAAACAGAATCCTATCAATAATGCTCCTCGTCCTGTAAGGTCAGCTGATGAACAAAATGGACATACAGTTCAAAACAATCAACAATTATACCGTGCTCACTCATATGGTCCAGAATATCCACCTACACCTATGGCAGCAATGGGTAATAATAACCCTTCTGGTAATGGCATGTGGGGTTCTTCAGGATGTCCTAAACCTTCTGAATATGTACAAGGGCTTATAGGGGTTGTTTTGCTTGCCTTGAACACATTAAAAAATGAAAGGATAATGCCAACTGAGGCAAATATAGCTGATTGCATCCGTTATGGAGATCCTAAACACCGCAACACTGATGTTAGGAAGGCTTTGGACAGTGCTATTGAGCAACAGATGGTGGTCAAACAGAATTTAGGTGCTTTGCAATTGTATATTGGTAAGAATGATAAACTTTGGAAGTGTGTAAATCCTATAGGTGGTAATCCCAATCAACACTCGAAAGAAATTTGGGATCAAATCCAAAAATTTTTAACCACTCCTTCTGGAAGACTTGCAATAATGGGTACTCAATGCAAATATGAAGCAGGTACTGTGATAAAGAATATGTGCTTAAAAAATGTTTCTTTGGGAGATGTTCTTCAGATTTTGAACATAGTGATTGGTCATAAAAAATGGATCATGCATCGTCAGTCAGGATGGCAACCGCTTGCCATTACTCTACCTCAGGCAAACTCTGATTTAGGTGTCACAGCCGAAATAAATGCATAG 1842 0.4381 MGGGGATPNAEAQYSSAKISVWWDIENCHVPKGCDPHAIAQNISSALVQMNYCGPVSISAYGDTTRITASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTNGESQQFGNNSNLSSSDTLQIPVSSSVQTKQQRDSFAEVHVGNHNHKFPNAGRGLDSRYQGKTTWRSPSQPNGPRPLNKPVGLQENHSSINSYRPGNSSPNVPPNGCAPNFVHRSTGQLWSNSSNLPGNSQMPHSQPLRPNSYPMQPPFAPNNQYPTNTHSFATPAVPPRPGGPNFTSGPLTNVPDIGNLNVSGLPKQNPINNAPRPVRSADEQNGHTVQNNQQLYRAHSYGPEYPPTPMAAMGNNNPSGNGMWGSSGCPKPSEYVQGLIGVVLLALNTLKNERIMPTEANIADCIRYGDPKHRNTDVRKALDSAIEQQMVVKQNLGALQLYIGKNDKLWKCVNPIGGNPNQHSKEIWDQIQKFLTTPSGRLAIMGTQCKYEAGTVIKNMCLKNVSLGDVLQILNIVIGHKKWIMHRQSGWQPLAITLPQANSDLGVTAEINA 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0255 613 Pfam OST-HTH Associated domain 548 603 IPR025677 -
Lele07g0255 613 PANTHER LIMKAIN B LKAP 14 493 IPR024768 GO:0005777|GO:0010468|GO:1903231
Lele07g0255 613 MobiDBLite consensus disorder prediction 170 208 - -
Lele07g0255 613 Pfam NYN domain 18 154 IPR021139 GO:0004540
Lele07g0255 613 CDD PIN_limkain_b1_N_like 18 142 - -
Lele07g0255 613 MobiDBLite consensus disorder prediction 170 322 - -
Lele07g0255 613 Gene3D - 9 161 - -
Lele07g0255 613 MobiDBLite consensus disorder prediction 252 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0255 Lele-ChrLele07 1391416 1394263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0255 10 201 C2H2 Transcription Factor Family AT5G61190 70.103 1.28e-83 281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0255 07 1391416 1394263 Lele08g0059 08 364683 367553 ECH
Lele07g0255 07 1391416 1394263 Lele07g0255 07 1391416 1394263 ECH
Lele05g0243 05 1358391 1361272 Lele07g0255 07 1391416 1394263 hybridization
Lele06g0059 06 391977 394885 Lele07g0255 07 1391416 1394263 hybridization