Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0247 ATGCCGCTGGGGAAATATTACTGCGACTATTGCGACAAGCACATACAGGACACGCCTACAGCTCGTAAACGACATCTTCAAGGTATCCAGCACCTCCGTGCTAAAGCACTCTGGTACGATTCCCTCAAATTTCAAGATCCTAGTCAGGTTTATCCAGATGGATTTGTCAAAGGGGTCTGCAATCGCTTCGTCAAAACGTACGGTGATTCTTGCAAGTATGCCCATCCAAGAAACTTGTCCAGTGCCAGACTTCAAGGGGGACTAATTGATAATATGCAGCCAGCAACATTAACGATGGCGACTAATTTGGTAGGCGGAGGCTCTACACCAGGGAATGTTGTGCAAGACAACATGGGAATGACATGGGGCAATTTACCTCCATCTTTGAAGCCTCCTCCTGAGGGTGGATATCCAGCCCTTCCCTTTGTGGACTGGGGATAG 441 0.483 MPLGKYYCDYCDKHIQDTPTARKRHLQGIQHLRAKALWYDSLKFQDPSQVYPDGFVKGVCNRFVKTYGDSCKYAHPRNLSSARLQGGLIDNMQPATLTMATNLVGGGSTPGNVVQDNMGMTWGNLPPSLKPPPEGGYPALPFVDWG 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0247 146 Pfam U1 zinc finger 5 37 IPR013085 GO:0008270
Lele07g0247 146 SMART ZnF_U1_5 3 38 IPR003604 GO:0003676|GO:0008270
Lele07g0247 146 PANTHER NUCLEASE-RELATED 1 146 - -
Lele07g0247 146 SUPERFAMILY beta-beta-alpha zinc fingers 4 43 IPR036236 -
Lele07g0247 146 FunFam U1 zinc finger family protein 3 57 - -
Lele07g0247 146 Gene3D Classic Zinc Finger 3 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0247 Lele-ChrLele07 1344807 1346034 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lele07g0247 zf-U1 2.2e-12 CL0361