Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0237 ATGGAAATTACTACGAAATGCAGTTGTGACTTACTGTGGCATACTGTGGGGACGGTGGCTGCAAAAGATCCAGGCGACACTCAGCCCTTGAATTACGATCAGGTCTTTCTTCTGGATTTTGTCCCTTCAGCTCTTGCTTTCTTGCTTAAGGGAGAACACGAGATCTTCAAGAACTTTCTTATACACAATTTGCAATTGCAGGGTCGTGCAGTCATTTTTCCAGAATATGCATGGTTGAGGTGGATCATCTTGTTGCGGACTTATGGGAAGCTCACTGGTGATTACAGTTTGCAAGAAAGGGTAGATGTTCAAACAGGCTTAAAAATGATCCTCAACTTGTGTTTAACTGATGGTTTTGATATATTCCCTTCTCCGCTGGTCATTGATGGGTCTTGCATGATAGGCAGGCGAATGGGTATTCATGGTCACCCACTCGAGATCTGA 444 0.4392 MEITTKCSCDLLWHTVGTVAAKDPGDTQPLNYDQVFLLDFVPSALAFLLKGEHEIFKNFLIHNLQLQGRAVIFPEYAWLRWIILLRTYGKLTGDYSLQERVDVQTGLKMILNLCLTDGFDIFPSPLVIDGSCMIGRRMGIHGHPLEI 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0237 147 Pfam Alkaline and neutral invertase 77 147 IPR024746 GO:0033926
Lele07g0237 147 Pfam Alkaline and neutral invertase 14 69 IPR024746 GO:0033926
Lele07g0237 147 SUPERFAMILY Six-hairpin glycosidases 20 124 IPR008928 GO:0005975
Lele07g0237 147 PANTHER - 15 71 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0237 Lele-ChrLele07 1311342 1313349 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2216 13 28511081 28512865 Lele07g0237 07 1311342 1313349 CCT
Lele15g0196 15 1160165 1161964 Lele07g0237 07 1311342 1313349 CCT
Lele07g0237 07 1311342 1313349 Lele08g0041 08 280583 283574 ECH
Lele07g0237 07 1311342 1313349 Lele07g0237 07 1311342 1313349 ECH
Lele06g0042 06 303198 306115 Lele07g0237 07 1311342 1313349 hybridization