Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0233 ATGGCATCTTTGCAGCCCGACTTAGATCCTATTCATTCCGATTCGTTGCCGCGATCCCGTCTTAAAGAGCGCACCGATTTTGGGTCCGATTCTAACCACCACAATTCTCTCCACCCCGTTCGATGGAGATCCGACCCGGAGCGTCGGATCTACTCCTTCAAGCTCGTCGATGCTCTGCGCCACGTCCTCCGTCGCAGTCCTTCTCTCCCGGCCAAACCTAGCAGCGGTCGTGAAATTCGTGAGACGGCAGATAGAGTTCTAGCCGCGACGGCCAAGGGCAGAACTCGATGGAGTCGAGCGATTCTGGCTTCTCCGCTCGGCCGTTGGAGATTTCAGAGGCAACACAAGAAGGTGAAGATGACAAGAGGACTGAAGAAACCGGAAATTAGGAAAGAGGGAAGGAGGTTAACGGCTCTGCAGAAGAAAGCGCGCGTTCTCGGCCGATTAGTTCCTGGTTGCCGTAAGGTCTCCTTTCCGAATCTTCTGGAAGAAGCCACTGATTATATATCGGCATTGGAGATGCAAGTTCGAGCCATGACGGCACTCACCGAATTGCTCGCCGTTGGTGGCGCGCCGGCCGATCGACACGAGGGGCCTCGACTGTAA 606 0.5528 MASLQPDLDPIHSDSLPRSRLKERTDFGSDSNHHNSLHPVRWRSDPERRIYSFKLVDALRHVLRRSPSLPAKPSSGREIRETADRVLAATAKGRTRWSRAILASPLGRWRFQRQHKKVKMTRGLKKPEIRKEGRRLTALQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTALTELLAVGGAPADRHEGPRL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0233 201 CDD bHLH_AtIBH1_like 130 183 IPR044549 GO:0006355
Lele07g0233 201 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 123 172 IPR011598 GO:0046983
Lele07g0233 201 MobiDBLite consensus disorder prediction 13 39 - -
Lele07g0233 201 MobiDBLite consensus disorder prediction 1 39 - -
Lele07g0233 201 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 186 IPR044660 GO:0006355
Lele07g0233 201 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 189 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0233 Lele-ChrLele07 1290358 1290963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0233 1 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 45.213 5.21e-39 131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0233 07 1290358 1290963 Lele08g0038 08 260834 264558 ECH
Lele07g0233 07 1290358 1290963 Lele07g0233 07 1290358 1290963 ECH
Lele05g0227 05 1270686 1271294 Lele07g0233 07 1290358 1290963 hybridization
Lele06g0038 06 284710 285297 Lele07g0233 07 1290358 1290963 hybridization