Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0228 ATGAAACTACTTCGTCAACTGATTTTCCCTCTGTTTGGGTTCATAATCAGTCGATCTTTCTGGGTTGGTAATAGCGCGGCTGGCGATTGTGGTGGGAGGCAAATTGCTTACACAATTACCGTTGGTCAATCAAACGGTCGGTTCAAAACAGTTCAAGCAGCCATTGATTCCATAAGCACCAACAATGCTCGCTGGGTTAAAATTCACATATATCCAGGCAAATATACAGAGCAGGTGCAGGTCCCTTACGAGAAGCCATGTATCTTCTTGGAAGGGGAAGGCAGAGCCGTTACGACAATAACGTACAATGGCCACCAACAAACAGATACCAGCGCCACATTCTCCTCCATTCCCAACAACGTCGTTGCCGCCGGCATCAACTTCGAGAACTCGTGGGATCTATCAACAGCGTCGGATTTGGATGACAACACAGGAGGAGATCAATTGGTACAACCAGCACTGGCGGCGAGAATATACGGGGACAAGTCTGCGTTCATCGATTGTGGATTCTTGGGTTTTCAAGACACGCTTTGGGATGTACAAGGTCGTCATTACTTTAAGAATTGTTATATCGAGGGTGCAGTAGACTTCATTTTTGGCAACGGCCAGTCCTATTACGAGAATTGTTATGTGAATGCGTCGTTGAGCACGTCAAGGGCACATGCGGATTTGGGTTTTATAACAGCACAAGGGCGAGAGTCAGGGGAGGAGGCAAGTGGGTTTGTATTCAAAGGAGGAAGGGTGGTTGGGAGTGGTCCGGTTATGTTAGGAAGAGCCTATGGACCATACTCCAGAGTCATATTTCACGAAACATATTTGGATTCAGTGGTTTCTCCTCAAGGATGGGATGCTTGGAGCCACATAGGATACGAGAAAAATTTGACGTACGCGGAAGTTAATTGTACAGGGCCGGGGGCGAGTTTGGAGAAGCGCGTGCGGTGGGAGACGAAACTCTCTGCGTCGCAGCTAAGGCGGTTTTCGTTATCATCCTTCATAAACCAAGATCGGTGGCTTGCCAATTTACCTTACCCGCTCAAATCAGATATTCCCCCAACTGAATCTCTGAGCCTATTGACTGAGGGCACATATGCAGATAGTCTCTTGACAGCATTACCTGTAGGTTATTTGCTTGACTCTGTCATGTTCCTTGAGCCCTGTCTTACCATTTCTCATCTTTCTATGGTCTGCTCTTCAGGGGCTATTGAGAGGCTATGTGGTGTAGCTTTAGGGTTAGCAGGAGTTAATCGGCCAATCGCACTTGCGGAGGCAAATGCTGTTCTGAATCAAATTGATCTCTTTATAGTTGGGGCACCGCTATTTGGAGTCCTTTCTATATTTCATCCAGTGACCTGTTTGAAAATTGATGCTGAATTAATGATGGGACTGTTGCCCGCTACCGTAATTCCTTTGCTTTTCTTGTCCTATTACTTCCATTTGTGGAAAGATGAATCCATTTTTCACATTGACACCCTCCATTCTCATAAAATAGATTGCTCTCGCACGATTGGCAACAAGCTCTCATCAGGTGTTCTTGACCTGCCTAGATCTTCACAAACCTATTACAAACGGTCCACTGAAGAACCTGAGCCACGCCATGACAACATAGTGATTAAAGGGGTAGAAGCAATTAAGCTAGGTTGGAAGGAGTATCTGGAGCAGCCAGTTCTTCCAGCAAGTCTTGCTTGTGTGCTCCTTTACTTCAATGTTGTCCTTACTCCTGGCAATTTGATGACAGCATTTTTAACACAGCGAGGCCTACACCCATCTGTCATTGGAGGATTTAGTGGATTATGTGCATTGATGGGTATTGCTGTTACATTTGTTTCTTCAACACTGGTCAAGCAATTTGGTCTTTGGAAGGCCGGAGCAATTGGATTGGTGTTTCAAGCTTTACTTCTTAGCATGGCTGTTGGTGTATATTGGAGTGGATCAATTTCTCAACAGAGCCCGCTTATTTTCTTCTTGTGTCTGATTATTCTTCAAACGGGGAACCCCTCCTCCAAAGCAAATCTCATTGGGACAACAGAGGTTGCTGTTGTTAGTTTTGCAGAGTGCGCAATGCTGGGAGTTGCAATAATTGCAAATGATGTTTCACATTTTGGGATTCTGGCAGTGTTGTCTCTTGCATCGGTGGTTGCTGCAGCTTGGATATTTTGCAGATGGTTTATGAATCGAACAGATGACCGACAAAGCCTTTTCTCCTGTGATCCTCATGATATTTATGGAGGGAAAAAGATTTCACAGCATGTAATTAAGGTTTGCATCTTGCAATGGCAAAGAGCAAGTGTATTTGGCAGTAGAAGTAGTGGAAGATGCCAGTCACCCAAGGGCCGTAGATTTGGATCATCATTGTCTTCTTCAGTAACAGACCAGAGGACGGAGCTGAGAAGGGGACTAGGGGAGCGAGATATAGATGTGAGTGTGATTGAATGGGAGAAAACGGGAGAATACGGTAAAGAGATGACTCAAGTTACTGTGAGAGGCGCTGGCCGCCATCTGCATCTAAAATGTAAAAACGCCTCGCGGGTTTCTCGCGTGCCATCTGTTGCTGTTAGTTGCCACAGTGATTTGGACTTGAAAGCGCCCATCTTTTCATGTCTATTGATTTTGATAGTTGATATATCACTTGGCTTGTTGATAACAGAGAAAACCAGAGACACAGAAGAAAGAAAAATGGGCTCTCTGGCAACTGAAACTGCAAAGAAAGCAATGTGGCTATATCCAAGAGTTTTGGGGTTTAAGCCTTCTGAAAGATGGGGGCACTCTGCTTGCTTTTCCGGGGGACTTGTGTATGTCTCTGGGGGGTGTTGTGGAGGGCTTCATATCAGCGATGTTCTGACTTTGGACCTTAACAAAATGACATGGAGCAAACTTGTAACAACCGGGGAAGGGCCTGGTCCTAGAGATAGCCACAGTGCTGTTCTTGTAGGCCATAAAATGATAGTTTTTGGTGGTACAAATGGCTTCAAGAAGGTTAATGACATTCATATCCTAGATCTGGATACCCTTGAGTGGGTTCGTCCTGAGTGTAAAGGGAACCCTCCTTCTCCACGCGAAAGTCACAGTGCCACTCTGTTTGGTGAAAAAAGATTAGTGATTTTTGGTGGTAGTGGAGAAGGAGATTCAAACTACTTAAACGATCTGCATATTCTAGATCTTCGAACCATGAGATGGACTTCTCCAGAGGTAAAAGGTGACTTGCCTGCCCCTAGGGACAGTCACACTACTCTCACAATTGGGAACAAGCTTTTTGTTTATGGAGGAGACTGTGGTGATCAGTATCGTGGTAATGTGAACATGCTGGATCTGGATTCTATGACTTGGTCAAAGTTGACTGTTCAAGGACCTTCCCCTGGCGTAAGAGCAGGACATGCGGCTGTTAGTGTTGGAACTAAGGTCTATATTATTGGAGGGGTTGGTGATAAACGTTACTATAATGATGTTTGGGTGTTTGATATCTGCACTTGTTCGTGGACTCAGCTTGAAATACGAGGTCAGCAACCTCAAGGGCGTTTTTCTCACACAGCGGTTGTCGCTGACATGGACATTGTCATATATGGAGGGTGTGGGGAAGATGAACGTCCTCTGGATGAATTGTTGGTGTTGCAGCTGGGGGCAGAGCATCCAAATGGACGTTACAACATATCCATGGGCAAAGTTTTCGGAAGCTGTTGGAAGAAGGCCTGCTCAAACGGAGCAGACAGCCGCAACTTGAAGACAGTACTCTTGGGGAATAATGTGGACGCTTTACGAAAGGGAGCTTATGAATTTGCCGTAGGAAAAAAGCAGCCTTTGCACTTTGAATCCGATACTTCCCAACAGAAGAGGAGGAGAATCGCTGCTTCAAAGGTGTGGGACGTTGATTTAGAACAAGAAGAGCATTCTCTTTCCTTGTCCCAGCATTCATCTCCGACTCAGTCCGATCAAGAACATAACCCTGCCCAAAAACTCACAGCTTCCACCTCGGATTCTCAGCGATTCCTCATGTTTAAACAGTTAAACCAAATGCCAAACAGTTCCCAACATGGCAGTGCCTCCATTAACCCAAAAGTACCGAAGAATTCCAACCAGAGGAATCACCAGGGATTCCATTATCTCAAGCAGCATCACTATGTTTATGATGCAGAACCCATGCCCATGGTTCGAGGGCCCATCCAACACCTGATTGGTGCTGAAGTCCAAGGGAGAGTCGACGGGGCCTTCGACTCGGGTTTGCTGATGACTGCGACGGTGAACGGCAAAATTTTCCGAGGAGTGTTGTTTGCACCCGGAACAGGAACAGTGTCAAGAGGGGCGAGCGTGGAAGCGAGTGGTTCGATGTATGGAGCGTTGGGGAAGAACTCGAATCATAAGTGGGAGAATGTGAGGGGTTGCCAGCAGGGAAGTGGGTGTTCGACGGCAGACTCGTGTCAGCTGACCCAGCCATTCCCAATTATGAGAGCCAAAGAGGAGAAAATGAGGAGCGATCTCAATGGCTTGGCTCTTACACTCGGAGGACCTGCCACTGCCCACCACCGCCATTAA 4524 0.4631 MKLLRQLIFPLFGFIISRSFWVGNSAAGDCGGRQIAYTITVGQSNGRFKTVQAAIDSISTNNARWVKIHIYPGKYTEQVQVPYEKPCIFLEGEGRAVTTITYNGHQQTDTSATFSSIPNNVVAAGINFENSWDLSTASDLDDNTGGDQLVQPALAARIYGDKSAFIDCGFLGFQDTLWDVQGRHYFKNCYIEGAVDFIFGNGQSYYENCYVNASLSTSRAHADLGFITAQGRESGEEASGFVFKGGRVVGSGPVMLGRAYGPYSRVIFHETYLDSVVSPQGWDAWSHIGYEKNLTYAEVNCTGPGASLEKRVRWETKLSASQLRRFSLSSFINQDRWLANLPYPLKSDIPPTESLSLLTEGTYADSLLTALPVGYLLDSVMFLEPCLTISHLSMVCSSGAIERLCGVALGLAGVNRPIALAEANAVLNQIDLFIVGAPLFGVLSIFHPVTCLKIDAELMMGLLPATVIPLLFLSYYFHLWKDESIFHIDTLHSHKIDCSRTIGNKLSSGVLDLPRSSQTYYKRSTEEPEPRHDNIVIKGVEAIKLGWKEYLEQPVLPASLACVLLYFNVVLTPGNLMTAFLTQRGLHPSVIGGFSGLCALMGIAVTFVSSTLVKQFGLWKAGAIGLVFQALLLSMAVGVYWSGSISQQSPLIFFLCLIILQTGNPSSKANLIGTTEVAVVSFAECAMLGVAIIANDVSHFGILAVLSLASVVAAAWIFCRWFMNRTDDRQSLFSCDPHDIYGGKKISQHVIKVCILQWQRASVFGSRSSGRCQSPKGRRFGSSLSSSVTDQRTELRRGLGERDIDVSVIEWEKTGEYGKEMTQVTVRGAGRHLHLKCKNASRVSRVPSVAVSCHSDLDLKAPIFSCLLILIVDISLGLLITEKTRDTEERKMGSLATETAKKAMWLYPRVLGFKPSERWGHSACFSGGLVYVSGGCCGGLHISDVLTLDLNKMTWSKLVTTGEGPGPRDSHSAVLVGHKMIVFGGTNGFKKVNDIHILDLDTLEWVRPECKGNPPSPRESHSATLFGEKRLVIFGGSGEGDSNYLNDLHILDLRTMRWTSPEVKGDLPAPRDSHTTLTIGNKLFVYGGDCGDQYRGNVNMLDLDSMTWSKLTVQGPSPGVRAGHAAVSVGTKVYIIGGVGDKRYYNDVWVFDICTCSWTQLEIRGQQPQGRFSHTAVVADMDIVIYGGCGEDERPLDELLVLQLGAEHPNGRYNISMGKVFGSCWKKACSNGADSRNLKTVLLGNNVDALRKGAYEFAVGKKQPLHFESDTSQQKRRRIAASKVWDVDLEQEEHSLSLSQHSSPTQSDQEHNPAQKLTASTSDSQRFLMFKQLNQMPNSSQHGSASINPKVPKNSNQRNHQGFHYLKQHHYVYDAEPMPMVRGPIQHLIGAEVQGRVDGAFDSGLLMTATVNGKIFRGVLFAPGTGTVSRGASVEASGSMYGALGKNSNHKWENVRGCQQGSGCSTADSCQLTQPFPIMRAKEEKMRSDLNGLALTLGGPATAHHRH 1507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0228 1507 SUPERFAMILY Kelch motif 910 1111 IPR015915 GO:0005515
Lele07g0228 1507 SUPERFAMILY Pectin lyase-like 35 342 IPR011050 -
Lele07g0228 1507 Gene3D - 886 1061 IPR015915 GO:0005515
Lele07g0228 1507 Pfam Pectinesterase 43 334 IPR000070 GO:0030599|GO:0042545
Lele07g0228 1507 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 37 339 - -
Lele07g0228 1507 FunFam Pectinesterase 33 342 - -
Lele07g0228 1507 ProSitePatterns Pectinesterase signature 2. 191 200 IPR033131 -
Lele07g0228 1507 Pfam Kelch motif 1018 1060 - -
Lele07g0228 1507 Pfam Kelch motif 1121 1161 IPR006652 GO:0005515
Lele07g0228 1507 Gene3D - 1062 1233 IPR015915 GO:0005515
Lele07g0228 1507 MobiDBLite consensus disorder prediction 1292 1320 - -
Lele07g0228 1507 MobiDBLite consensus disorder prediction 1337 1358 - -
Lele07g0228 1507 SUPERFAMILY MFS general substrate transporter 538 731 IPR036259 -
Lele07g0228 1507 Pfam Galactose oxidase, central domain 927 975 - -
Lele07g0228 1507 Gene3D - 32 349 IPR012334 -
Lele07g0228 1507 MobiDBLite consensus disorder prediction 1296 1320 - -
Lele07g0228 1507 Pfam Ferroportin1 (FPN1) 391 711 IPR009716 GO:0005381|GO:0016020|GO:0034755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0228 Lele-ChrLele07 1253467 1267343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0228 25 291 Carbohydrate Esterase AT2G19150 45.522 1.79e-67 228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0228 07 1253467 1267343 Lele07g0228 07 1253467 1267343 ECH
Lele05g0223 05 1235504 1238688 Lele07g0228 07 1253467 1267343 hybridization
Lele06g0033 06 220948 226020 Lele07g0228 07 1253467 1267343 hybridization