Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0227 ATGGGAAGACGAAGATGCCTGGAGATAAAAGGCGGGGAGAGTGGGACCCACACAGGAGAGCTGGAACCAATAAAAGAGGGAGAAGGATTCGAAGCTGAGTTTGACGTCAAAGACTGGACTCACAATGTATACGGCCTATATAATATACTACAGCACAACATGGACCATGTTTACAGGTTAAACACCAAGGAATTTTTCCGTTCGGAAGATGTCCGAGTCGGTGACGTCTCTTCTTCTTCCGATCAGTTGCATCTAGCTCCGGTGGCCAATAACTACGTACAGCTGCAAGTGCCTGATTCGGGAAGAACCGGGTCTGACGTGCCGGCCGACCAGTTCATCAAGACCCAAATTGCCCACCATCCTCTTTATCCCGATTTATTATCTGCTTACATTGAATGCCAAAAGGTTGGAGCTCCACCAGAACTGGCGTCGCTTCTGGAAGAAATGAGCCGTGAAAATCACCCCATCGGTGCTCAGCGTCAGATAGGGGACGATCCTCAACTCGACGATTTCATGGAATCATACTGCGAAGTTCTTCTAAGATACAAAGAGGAGTTATCGAGGCCCTTCAACGAAGCGACCTTGTTTTTGAGCAACATCGAATCCCAGCTCCACAACCTTTGCAAGGGAACATTAACAAATTCAACGGGATGTCGATCCGAGGAGGCAGGTGTGACTTCAGAAGAGGAACTAAGTTGTGGAGAGGTGGAAGCTGTTGAAGGTGGTGGATCTTGTGGCAGTTGCCAAGCTGATAAAGAGATCAAAGAGGTGCTACTTCGTAAGTACAGCGGCTATCTTAGCAATCTGCGGAAGGAGTTCTTGAAGAAAAGGAAAAGTGGTAAGCTTCCAAAAGATGCAAGGATGACACTGCTCAATTGGTGGAACACCCACTACAGATGGCCCTATCCCACGGAGGAGGAGAAAGTGAGGCTATCGGAAACGAGTGGACTGAATCAAAAGCAGATAAATAATTGGTTCATCAATCAGAGGAAACGGCACTGGAAGCCATCTGATGATATGCGATTTGCCGTCTTGGAGGGTGTAAGTGGGGCCCCCTTTGGACCCCCTTTCTGCTTCAACGCTTCTTCTCCACCTCCATCTCAACCTCATTGA 1113 0.4825 MGRRRCLEIKGGESGTHTGELEPIKEGEGFEAEFDVKDWTHNVYGLYNILQHNMDHVYRLNTKEFFRSEDVRVGDVSSSSDQLHLAPVANNYVQLQVPDSGRTGSDVPADQFIKTQIAHHPLYPDLLSAYIECQKVGAPPELASLLEEMSRENHPIGAQRQIGDDPQLDDFMESYCEVLLRYKEELSRPFNEATLFLSNIESQLHNLCKGTLTNSTGCRSEEAGVTSEEELSCGEVEAVEGGGSCGSCQADKEIKEVLLRKYSGYLSNLRKEFLKKRKSGKLPKDARMTLLNWWNTHYRWPYPTEEEKVRLSETSGLNQKQINNWFINQRKRHWKPSDDMRFAVLEGVSGAPFGPPFCFNASSPPPSQPH 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0227 370 Pfam KNOX1 domain 113 154 IPR005540 GO:0003677|GO:0005634
Lele07g0227 370 ProSitePatterns 'Homeobox' domain signature. 311 334 IPR017970 GO:0000981|GO:0006355
Lele07g0227 370 Gene3D - 279 340 - -
Lele07g0227 370 ProSiteProfiles 'Homeobox' domain profile. 273 336 IPR001356 GO:0003677
Lele07g0227 370 SMART HOX_1 275 340 IPR001356 GO:0003677
Lele07g0227 370 Pfam ELK domain 253 274 IPR005539 GO:0003677
Lele07g0227 370 SMART KNOX2_2 158 209 IPR005541 GO:0003677|GO:0005634
Lele07g0227 370 MobiDBLite consensus disorder prediction 1 20 - -
Lele07g0227 370 SMART KNOX1_2 111 155 IPR005540 GO:0003677|GO:0005634
Lele07g0227 370 SUPERFAMILY Homeodomain-like 275 342 IPR009057 -
Lele07g0227 370 SMART ELK_2 253 274 IPR005539 GO:0003677
Lele07g0227 370 Pfam KNOX2 domain 161 208 IPR005541 GO:0003677|GO:0005634
Lele07g0227 370 ProSiteProfiles ELK domain profile. 253 273 IPR005539 GO:0003677
Lele07g0227 370 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 96 342 - -
Lele07g0227 370 CDD homeodomain 276 337 IPR001356 GO:0003677
Lele07g0227 370 Pfam Homeobox KN domain 293 332 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0227 Lele-ChrLele07 1243019 1246772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0227 72 353 Homeobox Transcription Factor Family AT1G23380 49.653 2.05e-87 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Lele07g0227 KNOX2 1.1e-23 No_clan