Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0224 ATGGAGTCCCGTGAAGCGAAGCGTGTTATAGGTCCAATAATGTCTTCAGGATGGGACTTTTTTGAAGCCATGTATTATGGTGCTACCATGGCAGAAGGGTTCCTTAGAAGCATAGGAACATTCCTTGGCACTTATAGTGGAGGCTTCATTGCGGAGCAGAGTCTTGGGAGACTTGGTTATCTGGTGGGAAGTCAAATAGGAAGTTGGGCCTGGACCTCCAATTCCCATTCTTCTGAACTGGAACAACTTGTCAAGCTCATCGTTTCATCTTATTGTTTGCCCATGTATGGCTTTGATAACGCCCAAACTACTCTGTCAAAGAAAACAAAGCACCCTGCCCCTGCTCATAGTGTCGACATGGTGAGCCAGGAAGATTTGTTAATCGCTAAGATCTGTGAGCTCTACGATAAGATCTCCAGCCTCGAAAGTCTCAAACCCGGCCAAAATGTCGACACTCTTTTTACCCAACTCGTTCTCACGTGCATACCACCCAACCCTATCGATGTCACGAAGCTCCCCACAAGCCTTCAAGAGATTCGTTCCAAACTCATTCGTCTCTGTGGCCAAGCCGAAGGCCTCTTAGAGAGCCATTACTCCACCATCCTCGGCTCCTTCGACAACCCCCTCCACCACCTCGACATCTTCCCTTATTACTCCAACTACCTTAAACTTGGTCTCCTCGAGTTCACCATCCTCACTCAGCACTTCACTCGTATCCCTTCCAACATAGCCTTCGTCGGCTCTGGCCCTCTCCCTTTCACTTCGATTGTCTTGGCCTCCAATCACCTCCCCACCACCACCTTCCATAACTATGACCTCGACCCACTGGCCAATTCCATGGCGGTTCGCTTGTTTTCTTCTGATAATGATTTGTCCAAACGCATGGTTTTTCATACCAGCGACATCTTGGACGTGACCAAGGACTTGGAAGAGTACGAGGTTGTTTATTTGGCGGCTCTCGTGGGGATGGACAGTGACGAGAAGAGTCGGGTGATCGATCATTTGGCTAAGTATATGGCTCCGGGAGCAGTTCTGATGCTGAGGAGTGCCCATGGAGCTCGTGCTTTTCTGTACCCTGTGGTTGAGCCTGACGATCTTCGAGGCTTTGAGGTTCTCTCTGTGTTTCATCCGACCGACGAGGTTATCAATTCTGTTTTCATAGCACGAAAGTATCCCCTGCCTCTACAACACTCGCATGATCAGCAAGCTGGTCTTCCAAATATGATATTGCCCAACAAGTGTTCTGAGATACAAGCGTTTAATCCCCTCGTCAACCACGGGAATATGATTGAGGAGTTGACCCTTGAGGAACAGCTATCGTAA 1323 0.4875 MESREAKRVIGPIMSSGWDFFEAMYYGATMAEGFLRSIGTFLGTYSGGFIAEQSLGRLGYLVGSQIGSWAWTSNSHSSELEQLVKLIVSSYCLPMYGFDNAQTTLSKKTKHPAPAHSVDMVSQEDLLIAKICELYDKISSLESLKPGQNVDTLFTQLVLTCIPPNPIDVTKLPTSLQEIRSKLIRLCGQAEGLLESHYSTILGSFDNPLHHLDIFPYYSNYLKLGLLEFTILTQHFTRIPSNIAFVGSGPLPFTSIVLASNHLPTTTFHNYDLDPLANSMAVRLFSSDNDLSKRMVFHTSDILDVTKDLEEYEVVYLAALVGMDSDEKSRVIDHLAKYMAPGAVLMLRSAHGARAFLYPVVEPDDLRGFEVLSVFHPTDEVINSVFIARKYPLPLQHSHDQQAGLPNMILPNKCSEIQAFNPLVNHGNMIEELTLEEQLS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0224 440 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 119 395 IPR004298 GO:0030410|GO:0030418
Lele07g0224 440 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 253 379 IPR029063 -
Lele07g0224 440 Pfam Nicotianamine synthase protein 123 391 IPR004298 GO:0030410|GO:0030418
Lele07g0224 440 Gene3D Vaccinia Virus protein VP39 126 392 IPR029063 -
Lele07g0224 440 PANTHER NICOTIANAMINE SYNTHASE 3 122 432 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0224 Lele-ChrLele07 1227316 1232645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0224 120 440 Nicotianamine Synthase Gene Family AT1G09240 60.550 1.99e-131 380
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0224 07 1227316 1232645 Lele14g2158 14 26931884 26936655 CCT
Lele07g0224 07 1227316 1232645 Lele16g0199 16 1131883 1133857 CCT
Lele07g0224 07 1227316 1232645 Lele07g0224 07 1227316 1232645 ECH
Lele05g0221 05 1218872 1219837 Lele07g0224 07 1227316 1232645 hybridization