Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0214 ATGGGAATGCACTGGAACCGTAGGTTTTGGTTAAGTGAAAGTCTTTATACGATCAGCACGATGTATGAATCTGACGAGACATCTTTTCTTTACTCCTTTTGTTTCAAACTTCCACTCCAAATTGCTCTTTTTGATGTGAGGTCTCAATCTGTGGTGAGCGATGGTCCTTTGTCCTCTGCAAAGGTAGAGATCTTCGCCCTCGACGGTGATTTCTTTTCTCAAAGGTGTGAAGATTGGACTGAAGAGCAATTCAATGCAAATATCTTACCCCCAAGGGAGGGTAAGGGGCCATTACTGAATGGAGATCGGATCATTACTCTAGAAAAAGGGGTTGGGTGTATCCCCGAAATTAAGATCACCGACAACTCGAAGTGGAGGAGAAGCGGAAAGCTCAGCTTGGGAGCCAAAGTTTTGCAAGTAACTTCCTGTGGAGCAAGCATCAAGGAAGTGTACAAGAAACATCACCCCCCACGTTTGGATGATGATGTATGGCGTTTGGAGAGGATAGCCAAAAATGGACCAATATACCGGCGACTATGTGATCATGGAATAAGGACGGTTAGGGATCTTGTGCGGTCTTACAACATTGACCCATCTTCATTGCTTGAGGAAACGTTTCATGAGGAATTCGTTGATAACAAGAAGTGTTGCACTGATTGCAAAACTACTAAGACCCCACTCTGGAGAGGAGGACCTGCTGGGCCCAAGACTCTGTGCAACGCTTGCGGGATAAGATACAGGAAGAAAAGGGTTTTAACGGAGGGGTTGAGATTGAACAAAGGACAAGAGAAGAAGAGAGAGAAAACACAGAGTCGTGGTGGTGGTGGTAGAGCTGTTGGGAATGATGGAAACGATTTGAAGGAGTGCTTGAAGATGAATTTGGTGGCGTTAGGTGAGGAAGTTTTGCTGCAACAACGCTCACATTCGGTGGTGAAGAAGCAGAGGTGGCAGAGGAGGAGGAGGGAATTAGAGGAGATGGAACAAGCCGCCTTCTGCTTGATGGCCTTGTCTTGTGGACTTGTTTTTGCTTAA 1032 0.4593 MGMHWNRRFWLSESLYTISTMYESDETSFLYSFCFKLPLQIALFDVRSQSVVSDGPLSSAKVEIFALDGDFFSQRCEDWTEEQFNANILPPREGKGPLLNGDRIITLEKGVGCIPEIKITDNSKWRRSGKLSLGAKVLQVTSCGASIKEVYKKHHPPRLDDDVWRLERIAKNGPIYRRLCDHGIRTVRDLVRSYNIDPSSLLEETFHEEFVDNKKCCTDCKTTKTPLWRGGPAGPKTLCNACGIRYRKKRVLTEGLRLNKGQEKKREKTQSRGGGGRAVGNDGNDLKECLKMNLVALGEEVLLQQRSHSVVKKQRWQRRRRELEEMEQAAFCLMALSCGLVFA 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0214 343 ProSitePatterns GATA-type zinc finger domain. 217 242 IPR000679 GO:0006355|GO:0043565
Lele07g0214 343 PANTHER OS02G0177800 PROTEIN 38 202 IPR012416 GO:0005516
Lele07g0214 343 MobiDBLite consensus disorder prediction 258 280 - -
Lele07g0214 343 Pfam Calmodulin binding protein central domain 159 207 IPR046830 -
Lele07g0214 343 CDD ZnF_GATA 217 270 IPR000679 GO:0006355|GO:0043565
Lele07g0214 343 SMART GATA_3 211 263 IPR000679 GO:0006355|GO:0043565
Lele07g0214 343 ProSiteProfiles GATA-type zinc finger domain profile. 217 247 IPR000679 GO:0006355|GO:0043565
Lele07g0214 343 Gene3D - 212 273 IPR013088 GO:0006355|GO:0008270
Lele07g0214 343 MobiDBLite consensus disorder prediction 258 272 - -
Lele07g0214 343 Pfam GATA zinc finger 217 251 IPR000679 GO:0006355|GO:0043565
Lele07g0214 343 Pfam Calmodulin binding protein-like N-terminal domain 38 150 IPR046831 -
Lele07g0214 343 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 214 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0214 Lele-ChrLele07 1163958 1175155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0214 39 201 Calmodulin-binding Proteins AT5G62570 40.909 1.39e-39 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lele07g0214 Calmodulin_bind 1.4e-54 No_clan