Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0211 ATGGAGGAAGCTGTGACGATGGAGAAGAAGCAGAGGGTCGACAACGTCAACAGTTATAAAAGGTCCATGGGTTTATGGGCATTTGATCTGAGCTTAGCCCCTGGAAATGATTATAGGATTGGAGGTTTAGCATGTATGACCAAGATGAGTAAGACGGAATTACCAAGGACGAAGGCGCCACTTGTTCCTTTGGCAACTTTGATTGGCCGCGAGCTTCGAAATGAAAAAGTTGAAAAACCTTTTGTGAGGTATGGACAGGCTGGCTTGGCAAAGAAAGGGGAGGATTACTTTTTAATCAAGACAGACTGCCAGAGGATTCCTGGGGATCCATCAACATTGTTTTCTGTTTTTGCGATCTTTGACGGGCACAATGGTATATCCGCTGCTATTTTTGCAAAGGAAAATTTACTTAATCATGTTATGAGTGCAATACCACAAGATATCAGCAGAGATGAGTGGCTTCAAGCTCTTCCTCGGGCTCTAGTTGTTGGGTTTGTGAAAACTGACATAGAATTTCAGAAAAAAGGCGAGACTTCTGGGACTACAGCAACATTTGTTCTGGTTGATGGTTGGACTGTCACTGTTGCATCTGTTGGGGATTCCCGATGTATATTAGATACCCAGGGAGGTGTAGTATCTCTTCTGACAGTTGATCACAGACTGGAAGAGAATGCAGAAGAGAGGGAACGTGTTACTGCTAGTGGCGGTGAAGTAGGAAGACTCAACGTGTTTGGAGGCAATGAGGTAGGACCCCTTCGCTGCTGGCCTGGTGGATTGTGTCTTTCTAGATCGATTGGCGACACAGATGTGGGAGAATTTATTGTGCCAATTCCACATGTTAAGCAAGTGAAGCTTTCAAATGCTGGTGGAAGGCTTATCATAGCTTCTGATGGCATTTGGGATGCTTTATCTTCTGATACTGCCGCCAAGTCTTGTCGGGGTCTACCTGCAGAGCTTGCTGCAAAGCTGGTAGTTAAGGAGGCTTTAAGGTCAAGGGGACTGAAGGATGATACAACCTGCCTTGTTGTAGACATTATTCCTTCAGACCATCCTGTATTACCACCAATTCCAAAAAAGAAACATAATGTGATAACTTCACTTCTCTTTGGAAACTCCACAAACAAAGCTAGTAATAAGCTTTCTGCTGTGGGAGTTGTAGAGGAGTTATTTGAAGATGGTTCTGCAATGCTTGCAGAAAGGCTTGGTAAGGATTTTCCTTTTGATGCGAACTCCGGAATTTTCCATTGTGCAGTCTGCCAGGTGGATCAACCTCCTGGAGATGGTTTATCAGTGAACTCTGGACCTTTTTTCTCGCCAGCATCAAAGCCATGGGAAGGCCCATTCCTCTGTTCTAACTGTCGAAGGAAGAAAGATGCCATGGAAGGAAAAAGGCCTAGCAGATCCACAGTGACAGCATAG 1419 0.4475 MEEAVTMEKKQRVDNVNSYKRSMGLWAFDLSLAPGNDYRIGGLACMTKMSKTELPRTKAPLVPLATLIGRELRNEKVEKPFVRYGQAGLAKKGEDYFLIKTDCQRIPGDPSTLFSVFAIFDGHNGISAAIFAKENLLNHVMSAIPQDISRDEWLQALPRALVVGFVKTDIEFQKKGETSGTTATFVLVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDTAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPPIPKKKHNVITSLLFGNSTNKASNKLSAVGVVEELFEDGSAMLAERLGKDFPFDANSGIFHCAVCQVDQPPGDGLSVNSGPFFSPASKPWEGPFLCSNCRRKKDAMEGKRPSRSTVTA 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0211 472 SMART PP2C_SIG_2 99 345 IPR001932 -
Lele07g0211 472 PANTHER PROTEIN PHOSPHATASE 94 344 - -
Lele07g0211 472 Pfam Protein phosphatase 2C 112 328 IPR001932 -
Lele07g0211 472 Gene3D - 81 349 IPR036457 -
Lele07g0211 472 SUPERFAMILY PP2C-like 86 345 IPR036457 -
Lele07g0211 472 ProSiteProfiles PPM-type phosphatase domain profile. 76 345 IPR001932 -
Lele07g0211 472 FunFam probable protein phosphatase 2C 5 83 350 - -
Lele07g0211 472 SMART PP2C_4 73 343 IPR001932 -
Lele07g0211 472 CDD PP2Cc 91 345 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0211 Lele-ChrLele07 1134042 1137665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0211 49 471 PP2C-type Phosphatase Gene Family AT1G09160 77.049 0.0 667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0211 07 1134042 1137665 Lele07g0211 07 1134042 1137665 ECH
Lele05g0208 05 1119358 1122847 Lele07g0211 07 1134042 1137665 hybridization
Lele06g0016 06 95887 106766 Lele07g0211 07 1134042 1137665 hybridization