Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0207 ATGTCTTCTTTGAGCAGAGAATTGGTGTTTCTCATTCTCCAATTTCTGGAGGAGGAGAAGTTTAAAGAGTCTGTGCACAAGCTTGAAAAGGAGTCTGGGTTTTTCTTCAACATGAAGTACTTTGAGGAAAAAGTCCAGGCTGGAGAATGGGAAGAAGTTGAGAAGTACTTGACAGGGTTTACTAAAGTTGATGATAATCGATACTCCATGAAGATTTTCTTTGAAATCAGAAAACAAAAATATCTGGAAGCGCTCGATAGGCAAGACAAGGCAAAGGCTGTTGAGATACTAGTAAATGATTTGAAAGTGTTCTCCACTTTCAATGAGGATCTATATAAAGAAATTACCCAGCTGTTAACTCTTAATAATTTCAGGGAGAATGATCAGCTGGCCAAATATGGTGACACTAAAACAGCTCGAAGCATTATGTTGATAGAGCTGAAAAAATTGATAGAAGCAAATCCTCTATTTCGTGATAAGCTTCTCTTCCCTACTCTCAAGTCATCGAGATTGAGGACGTTAATCAATCAAAGCTTGAACTGGCAGCATCAGCTTTGCAAAAATCCTAGGCCAAACCCAGATATCAAGACTTTATTTACAGATCACACATGTTCACCTCCTAATGGTCCTCTAACACCCACACCCGTCAATCTTCCAGTTGCGGCAGTAGCAAAGCCTGCTGTTTATACATCACTTGGTGCTCATGGTTCCTTCCCACCTGCTGCTGCTAATTCCATAGCTGGTTGGATGGCAAATGCTTCTGCTTCATCATCTGTCCAAGCAGCAGTTGTTACTGCATCATCCATGCCTGTTGCTCAGAATCAAGCATGCACAGAAATTCTGTATGCAAATCCTAGAAGAAGACAAGTTTTGTCCAGTCAGTTTTGTTCTGCGCATGCATTTCCACTGCAACTGATTGCTTTGTCAATGCCCATCTTGAAACGTCCAAGAACACCTCCGGCAGCCCCTGGCTTGGTTGATTATCAGAATTCTGATCATGAGCAGTTAATGAAAAGGCTTCGACCTGTTCATTCTGTAGAGGAGGTTTCCTATCCTACAGCTCGACAAGCTTCTTGGTCACTGAATGATCTGCCAAGAACAGTGGCTATGACACTGCATCAAGGATCCTCTGTTAACAGCATGGACTTTCACCCTTCACACCAGACATTACTTCTTGTTGGTTCTACTAATGGTGAAATTGCCCTATGGGAACTCGGGTTACGGGAGAGGTTGGTTTCAAAGCCATTCAAGATATGGGATCTATCAGCATGCTCATTGCCGTTTCAGGCAGCTGTTGTCAAAGATACGCCAATTTCTGTCAGCTGTGTTATGTGGAGCCCGGATGGAAATTTTGTTGGTGTTGCATTTAGCAAACATTTGGTTCACTTGTATGCCTATACTGGGTCAAATGAGCTGAGCCAGCGATTGGAGATTGATGCCCATAATGGTGGCGTGAATGACTTGGCATTTGCTCATCCAAATAAGCAACTATGTATTCTGACCTGTGGTGATGATAAGATGATAAAGGCGTGGGAGTTAAATGGACGAAAACTATTCAACTTTGAGGGGCATGAAGCACCTGTCTATTCCATCTGTCCTCATCACAAAGAGAACATTCAGTTTATATTTTCAACTGCCGTTGATGGAAAAATAAAGGCCTGGTTGTATGATAATATGGGTTCCAGAGTTGACTATGATGCTCCGGGTCACTGCTGTACCACAATGCTTTACAGTGCTGATGGAAGTAGATTGTTTTCTTGTGGAACAAGTAAAAATGGAGAATCTTTCTTAGTTGAATGGAATGAAAGTGAAGGAGCTATTAAGAGGTCGTATAATGGGTTCCGAAAGAAATCAAATGGCGTTGTGCAGTTTGACACAACCCAAAATCGCTTTTTGGCTGCAGGTGAAGATGGCCAAATAAAGTTCTGGGATATGGACAATGTTAATCTTCTAACAAGCACTGATGTAGAGGGTGGACTACAGAGTCTTCCACGTTTGAGGTTTAATAAGGAAGGAAATCTTCTTGCTGTTACTACTGCGGACAATGGATTCAAGGTCCTTGCAAATGCTACTGGTCTGAGATCCTTAAGGGCAATGGAATCTCCAACATTTGAAGCATTGAGATCTCCCATGGAATCAGCTTCAAATAAGGTTTCTGGCTCCCCTGCTGTAAATGTCAGTCCTGTCAACTGTAAAGTAGAGAGGAGCTCGCCTGTCAGGCCATCTCCAATCCTTAACGGAGTTGACCCTATGGGTCTAAGTTTGGAGAAACCTAGAACTATGGAAGATGTGATAGATAGAACTAAACCATGGCAGCTATCTGAAATTTCGGAAGCTATCAAATGTCGGTTAGTTACAATGCCGGAGAGTGCAGATGCTTCCAGCAAGGTTGTTCGACTTTTATATACAAATTCTGGTGCTGGTGTTTTGGCACTTGGTTCAAATGGTATTCAGAAACTGTGGAAGTGGACTCGTAATGAACCGAATCCTGCTGGGAAGGCCACTGCCAGTGTTGTTCCACAACATTGGCAACCCAACAGTGGTCTTCTTATGACCAATGATATTTCTGGTGTCAACCTTGAAGAAGCAGTTCCCTGCGTTGCACTCTCAAAGAATGACTCTTACGTTATGTCCGCCTGTGGTGGGAAGGTTTCATTATTTAACATGATGACATTCAAGGTAATGACAACGTTCATGCCGCCACCTCCTGCCTCTACTTTCCTGTCTTTCCACCCACAGGATAACAACATCATAGCCATTGGGATGGAGGATTCTACGATTCACATTTATAATGTTAGAGTGGATGAGGTCAAATCGAAATTGAGGGGTCACCAGAAGCGTATTACTGGTTTAGCCTTTTCAACAAGTCTTAACATACTGGTCTCATCCGGTGCTGATGCCCAACTTTGCGTGTGGAGCATTGATACATGGGAGAAAAGAAAATCAATGACAATACAACTACCTGCGGGAAAGTCTCCTGTCGGTGATACCAGAGTCCAGTTCCATTCTGATCAACTCCGCTTATTGGTAGTTCATGAGACTCATTTGGCAATATATGATGCTTCCAAGATGGATCGCATTCGACAGTGGCTTCCACAAGATACTCTGTCTGCTCCCATATCATATGCAACTTATTCAAGCAACAGTCTGTTAATATATGCTACCTTTTTTGATGGTAACATTGGGGTCTTTGATGCTGATAGCTTGAGGCTAAGATGTCGTATTGCTCCATCAGCATACTTATCACAGGCAGCTTTAATAGCAAGCCAAGCTGTGTACCCTCTGGTTGTTGCAGCTCATCCACAAGAGCCCAACCAATTCGCTGTTGGATTGACTGATGGATCCGTCAAAGTAATAGAACCCTCTGAATCAGAGGGCAAATGGGGGTCTACTCCACCCGTAGATAATGGAGTGCTAAACGGTAGGCAAGGGCAATCATCTACTTCAAATATCCACACTCCTGATCAAGCACAAAGATAA 3480 0.4293 MSSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLTGFTKVDDNRYSMKIFFEIRKQKYLEALDRQDKAKAVEILVNDLKVFSTFNEDLYKEITQLLTLNNFRENDQLAKYGDTKTARSIMLIELKKLIEANPLFRDKLLFPTLKSSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFTDHTCSPPNGPLTPTPVNLPVAAVAKPAVYTSLGAHGSFPPAAANSIAGWMANASASSSVQAAVVTASSMPVAQNQACTEILYANPRRRQVLSSQFCSAHAFPLQLIALSMPILKRPRTPPAAPGLVDYQNSDHEQLMKRLRPVHSVEEVSYPTARQASWSLNDLPRTVAMTLHQGSSVNSMDFHPSHQTLLLVGSTNGEIALWELGLRERLVSKPFKIWDLSACSLPFQAAVVKDTPISVSCVMWSPDGNFVGVAFSKHLVHLYAYTGSNELSQRLEIDAHNGGVNDLAFAHPNKQLCILTCGDDKMIKAWELNGRKLFNFEGHEAPVYSICPHHKENIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPGHCCTTMLYSADGSRLFSCGTSKNGESFLVEWNESEGAIKRSYNGFRKKSNGVVQFDTTQNRFLAAGEDGQIKFWDMDNVNLLTSTDVEGGLQSLPRLRFNKEGNLLAVTTADNGFKVLANATGLRSLRAMESPTFEALRSPMESASNKVSGSPAVNVSPVNCKVERSSPVRPSPILNGVDPMGLSLEKPRTMEDVIDRTKPWQLSEISEAIKCRLVTMPESADASSKVVRLLYTNSGAGVLALGSNGIQKLWKWTRNEPNPAGKATASVVPQHWQPNSGLLMTNDISGVNLEEAVPCVALSKNDSYVMSACGGKVSLFNMMTFKVMTTFMPPPPASTFLSFHPQDNNIIAIGMEDSTIHIYNVRVDEVKSKLRGHQKRITGLAFSTSLNILVSSGADAQLCVWSIDTWEKRKSMTIQLPAGKSPVGDTRVQFHSDQLRLLVVHETHLAIYDASKMDRIRQWLPQDTLSAPISYATYSSNSLLIYATFFDGNIGVFDADSLRLRCRIAPSAYLSQAALIASQAVYPLVVAAHPQEPNQFAVGLTDGSVKVIEPSESEGKWGSTPPVDNGVLNGRQGQSSTSNIHTPDQAQR 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0207 1159 Gene3D - 434 701 IPR015943 GO:0005515
Lele07g0207 1159 Gene3D - 793 1133 IPR015943 GO:0005515
Lele07g0207 1159 ProSiteProfiles LIS1 homology (LisH) motif profile. 4 36 IPR006594 GO:0005515
Lele07g0207 1159 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 941 976 - -
Lele07g0207 1159 Pfam WD domain, G-beta repeat 478 511 IPR001680 GO:0005515
Lele07g0207 1159 Pfam WD domain, G-beta repeat 940 973 IPR001680 GO:0005515
Lele07g0207 1159 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 427 978 IPR011047 -
Lele07g0207 1159 MobiDBLite consensus disorder prediction 1120 1159 - -
Lele07g0207 1159 SMART Lish 4 36 IPR006594 GO:0005515
Lele07g0207 1159 SMART WD40_4 365 404 IPR001680 GO:0005515
Lele07g0207 1159 SMART WD40_4 1029 1065 IPR001680 GO:0005515
Lele07g0207 1159 SMART WD40_4 891 931 IPR001680 GO:0005515
Lele07g0207 1159 SMART WD40_4 426 465 IPR001680 GO:0005515
Lele07g0207 1159 SMART WD40_4 604 644 IPR001680 GO:0005515
Lele07g0207 1159 SMART WD40_4 852 888 IPR001680 GO:0005515
Lele07g0207 1159 SMART WD40_4 514 555 IPR001680 GO:0005515
Lele07g0207 1159 SMART WD40_4 558 601 IPR001680 GO:0005515
Lele07g0207 1159 SMART WD40_4 934 973 IPR001680 GO:0005515
Lele07g0207 1159 SMART WD40_4 1079 1120 IPR001680 GO:0005515
Lele07g0207 1159 SMART WD40_4 469 512 IPR001680 GO:0005515
Lele07g0207 1159 SUPERFAMILY YVTN repeat-like/Quinoprotein amine dehydrogenase 366 468 IPR011044 -
Lele07g0207 1159 FunFam Topless-related protein 3 760 994 - -
Lele07g0207 1159 Gene3D - 352 415 IPR015943 GO:0005515
Lele07g0207 1159 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 34 92 IPR006595 -
Lele07g0207 1159 SUPERFAMILY YVTN repeat-like/Quinoprotein amine dehydrogenase 999 1135 IPR011044 -
Lele07g0207 1159 MobiDBLite consensus disorder prediction 734 753 - -
Lele07g0207 1159 ProSiteProfiles Trp-Asp (WD) repeats profile. 622 653 IPR001680 GO:0005515
Lele07g0207 1159 MobiDBLite consensus disorder prediction 1136 1159 - -
Lele07g0207 1159 ProSiteProfiles Trp-Asp (WD) repeats profile. 941 982 IPR001680 GO:0005515
Lele07g0207 1159 ProSitePatterns Trp-Asp (WD) repeats signature. 499 513 IPR019775 -
Lele07g0207 1159 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 1141 IPR027728 GO:0006355
Lele07g0207 1159 ProSiteProfiles Trp-Asp (WD) repeats profile. 371 413 IPR001680 GO:0005515
Lele07g0207 1159 SMART ctlh 34 92 IPR006595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0207 Lele-ChrLele07 1113353 1122884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0207 477 685 Miscellaneous Gene Families AT5G08390 25.352 3.29e-06 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2248 13 28668746 28670362 Lele07g0207 07 1113353 1122884 CCT
Lele14g2182 14 27025097 27027502 Lele07g0207 07 1113353 1122884 CCT
Lele15g0164 15 1007329 1008940 Lele07g0207 07 1113353 1122884 CCT
Lele16g0173 16 1022836 1025853 Lele07g0207 07 1113353 1122884 CCT
Lele07g0207 07 1113353 1122884 Lele07g0207 07 1113353 1122884 ECH
Lele05g0205 05 1102208 1111879 Lele07g0207 07 1113353 1122884 hybridization
Lele06g0012 06 72926 82490 Lele07g0207 07 1113353 1122884 hybridization