Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0206 ATGGGGCATATCTCGTCCATGTTCAATGGATTGGCAAGGTCTTTCTCAATAAAGAAAGCCAAGAGTTCTGGGCAATGTGATGGAAGAGAATCCGCCGAAGCAATGGCCAAGGAAGCTAAGAAAAATGCCCAGATTCTCCGCACCTCCGGCACCGTTCATGTCCAGGGCTCCAACAACTTCGCCTCAATTTTTTCCAAGAAAGGCCAGAAAGGAGTCAACCAGGATTGTTGCATAGTGTGGGAGGAATTTGGATGTCAAGAGGACATGATGTTCTGTGGGATATTTGACGGCCACGGGCCATGGGGTCACTTCGTGGCTAAGAGAGTAAGAAAGGCAATGGCTCCATCTCTCTTGTGTAACTGGCAGGAGACACTTGCCCAGACCTCGCTCGATCCTGATTTCGACTTAGAGGATGAGAAAAAGCAACACCCTTTCAATATATGGAAGCACTCCTACTTGAAAACTTGTGCCGCCATTGATCACGAGCTAGGGCGCTCTCGCAAAATCGATTCTTTCTACAGCGGAACCACTGCTCTCTCCATTGTTCGACAGGTGTGGGATGTGATATCGAATGAAGAAGCAGTGCGAATAGTGGCTTCGACAGAGGACAGAGGGAAGTCGGCAAGAAGATTGGTGAAGTGTGCGGTGGCGGCATGGAAGCGCAAGAGATGGGGCTTTGCCATGGACGACATTTCTGCAATTTGTGTATTCTTGCATCCTCCTCCTCCTCCGTCTCTCCTCAGAGAGGATTGA 753 0.4954 MGHISSMFNGLARSFSIKKAKSSGQCDGRESAEAMAKEAKKNAQILRTSGTVHVQGSNNFASIFSKKGQKGVNQDCCIVWEEFGCQEDMMFCGIFDGHGPWGHFVAKRVRKAMAPSLLCNWQETLAQTSLDPDFDLEDEKKQHPFNIWKHSYLKTCAAIDHELGRSRKIDSFYSGTTALSIVRQVWDVISNEEAVRIVASTEDRGKSARRLVKCAVAAWKRKRWGFAMDDISAICVFLHPPPPPSLLRED 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0206 250 Gene3D - 41 183 IPR036457 -
Lele07g0206 250 Gene3D - 184 240 IPR036457 -
Lele07g0206 250 PANTHER PROTEIN PHOSPHATASE 38 182 - -
Lele07g0206 250 SUPERFAMILY PP2C-like 52 241 IPR036457 -
Lele07g0206 250 Coils Coil 29 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0206 Lele-ChrLele07 1104465 1105912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0206 1 205 PP2C-type Phosphatase Gene Family AT5G27930 64.593 6.76e-94 277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2250 13 28677737 28680628 Lele07g0206 07 1104465 1105912 CCT
Lele14g2184 14 27029900 27033086 Lele07g0206 07 1104465 1105912 CCT
Lele15g0162 15 999038 1000200 Lele07g0206 07 1104465 1105912 CCT
Lele16g0171 16 1017505 1018761 Lele07g0206 07 1104465 1105912 CCT
Lele07g0206 07 1104465 1105912 Lele07g0206 07 1104465 1105912 ECH
Lele05g0203 05 1095429 1096886 Lele07g0206 07 1104465 1105912 hybridization
Lele06g0011 06 66882 68312 Lele07g0206 07 1104465 1105912 hybridization