Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0172 ATGGAGGATGAGAGATTGTTGCCGATAGCGAATGTGGGAAGGATAATGAGGCAAATACTGCCAGGAAGTGCGAAGATCTCAAAAGAAGGGAAGCAGATAATGCAAGAATGTGCCACTGAGTTCATAAGCTTTGTGACAGAGGAAGCTTCTGACAAGTGTCACAAAGAGAATCGCAAGACCGTCAACGGGGATGACATCTGTTGGGCCCTCAGTGCTCTAGGGTTTGATAACTATGCTGAGGCCATTGCCAGGTACTTGCATAAACACAGGCAAGCTGAGAGGGACAAATTGATCAACCACAAAACGCAGCACTTGCTTCAAAACTCTTCTTCCGCCACAAAATCAGCTAGCTCCGTCGTCCAAAGCGACCAGCACCAAACTGAAGAGAATAGGGTTTCTGAAGAGAAGGCTCCTACAACTAATCAATCTCCATGA 435 0.4667 MEDERLLPIANVGRIMRQILPGSAKISKEGKQIMQECATEFISFVTEEASDKCHKENRKTVNGDDICWALSALGFDNYAEAIARYLHKHRQAERDKLINHKTQHLLQNSSSATKSASSVVQSDQHQTEENRVSEEKAPTTNQSP 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0172 144 MobiDBLite consensus disorder prediction 96 144 - -
Lele07g0172 144 Gene3D Histone, subunit A 1 143 IPR009072 GO:0046982
Lele07g0172 144 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 2 132 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lele07g0172 144 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 6 70 IPR003958 -
Lele07g0172 144 MobiDBLite consensus disorder prediction 102 126 - -
Lele07g0172 144 PRINTS CCAAT-binding transcription factor subunit A signature 53 71 - -
Lele07g0172 144 PRINTS CCAAT-binding transcription factor subunit A signature 72 90 - -
Lele07g0172 144 PRINTS CCAAT-binding transcription factor subunit A signature 34 52 - -
Lele07g0172 144 SUPERFAMILY Histone-fold 3 117 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0172 Lele-ChrLele07 906772 907206 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0172 1 96 CCAAT-HAP3 Transcription Factor Family AT1G09030 76.289 4.09e-53 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lele07g0172 CBFD_NFYB_HMF 5.9e-25 CL0012