Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0157 ATGGATCACCAAGGAGGGTATAGCGCAAACCCATCTATGGGGGCTGTTGGTAGTGGAGCTCAGTCGCCTTATGGTTCTAATCCTTACCAGCCAAGCCGAATATCCGGGGCACCCGGTTCTGTCGTTACATCGGTTGGGGCCATTCAAACCACCGGTCAGCCTGCTGGAGCTCAGCTAGGGCAACATCAACTTGCTTATCAGCATATTCAGCAACAGCAGCAGCAACTTCAGCAACAACTCCAAACCTTTTGGGCAAATCAGTACCAAGAAATTGAGAGAGTAAATGATTTCAAGAACCACAGCCTGCCCCTGGCAAGGATCAAGAAGATTATCAAAGCGGATGAGGATGTTAGGATGATATCAGCTGAGGCACCTGTTATATTTGCCAGGGCGTGCGAAATGTTCATATTAGAGTTGACCTTGCGTTCTTGGAACCACACCGAGGAAAACAAAAGGAGAACACTTCAAAAAAATGATATAGCAGCAGCAATCACAAGGACTGACATCTTTGATTTTCTGGTTGAAATTGTGCCCCGGGAGGACTTGAAAGATGAAGTACTTGCATCAATCCCCAGAGGAACCATGCCGGTTGCAGGGCCTGCTGATGCTCTTCCTTATGGCTATATGCCACCACAGCATGCTCCTCAAGTTGGCGGCGCTGCTGGGGTCATCATGGGTAGGCCTGTAATGGACCCGAGCATATATCCTCAACAATCTCATCCCTACATGTCACAACAAATGTGGCCACGGCCACAAGAGCAGCAACAATCATCTCCAGATCATTAG 786 0.486 MDHQGGYSANPSMGAVGSGAQSPYGSNPYQPSRISGAPGSVVTSVGAIQTTGQPAGAQLGQHQLAYQHIQQQQQQLQQQLQTFWANQYQEIERVNDFKNHSLPLARIKKIIKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVEIVPREDLKDEVLASIPRGTMPVAGPADALPYGYMPPQHAPQVGGAAGVIMGRPVMDPSIYPQQSHPYMSQQMWPRPQEQQQSSPDH 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0157 261 Gene3D Histone, subunit A 64 179 IPR009072 GO:0046982
Lele07g0157 261 SUPERFAMILY Histone-fold 70 173 IPR009072 GO:0046982
Lele07g0157 261 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 65 231 - -
Lele07g0157 261 MobiDBLite consensus disorder prediction 237 261 - -
Lele07g0157 261 MobiDBLite consensus disorder prediction 234 261 - -
Lele07g0157 261 FunFam Nuclear transcription factor Y subunit gamma 67 179 - -
Lele07g0157 261 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 101 164 IPR003958 -
Lele07g0157 261 MobiDBLite consensus disorder prediction 1 36 - -
Lele07g0157 261 Coils Coil 59 79 - -
Lele07g0157 261 MobiDBLite consensus disorder prediction 14 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0157 Lele-ChrLele07 828510 829295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0157 18 248 CCAAT-HAP5 Transcription Factor Family AT1G08970 65.801 3.53e-86 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lele07g0157 CBFD_NFYB_HMF 2.9e-17 CL0012