Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0109 ATGAATAGTGTCGCACACCTTGAACCGGGTTACTCTGAATTCGTCGAAGTTGATCCTACTGGCAGATACGGCAGATACAATGAAATCCTCGGCAAAGGAGCTTCAAAGATAGTATATAGAGCATTTGATGAGTATCAAGGGATTGAAGTCGCATGGAACCAAGTCAAGCTGTACGATTTCCTGCAAAGCCCTGAAGACCTTGAGAGGCTCTACTGTGAAATTCATCTTCTCAAAACACTGAAGCACGGAAACATTATGAAATTTTACACTTCTTGGGTTGACACAGCTAATAGAAATATCAACTTCATCACTGAAATGTTCACTTCTGGTACTCTCAGACAGTATAGGCTAAAGCACAAGAGAGTAAACATCAGAGCAGTGAAGCATTGGTGTAGACAGATATTGAGAGGACTTCTGTATCTTCATAGCCACGACCCACCTGTGATCCACAGAGATCTCAAATGCGACAACATATTTATTAATGGAAACCAAGGGGCAGTAAAGATTGGGGATCTTGGCCTGGCAGCAATTCTCAAAAAATCGCATGCTGCTCATTGTGTCGGAACACCTGAGTTTATGGCCCCAGAAGTATATGAAGAGGCATATAATGAATTAGTTGACATATATTCCTTTGGAATGTGCATAATAGAGATGGTGACATTTGAATATCCTTATAGCGAATGCACTCATCCAGCTCAAATCTACAAGAAAGTTATATCTGGAAAAAAACCAGATGCTTTGTATAAAGTTAAAGATCCAGAAGTGCGACAATTTGTTGAGAAATGCTTGGCAACAGTTTCTTTAAGGCTCTCAGCAAGGGAGCTTCTTGATGACCCGTTTCTCCAAATTGATGATAACTTTTCTAATTTGGCACTAGTAGACAATGGAGAATTTGATGGCTTGGGTCCTTTTGTCCGGCATCCATTCTTAGATCTTCACCGAAGTTATAGCAACTTAAGTGGTGAATACACAAATTATTATGGATATGAAGCTCCAGGATACTGGTATTCTCATCCAGGTGACACTGAACCAAGTGGAATTGAACTTTTTGAGCACCTTGATGATGATCCATCTGAAGATGTTGATATAAGCATCAGAGGCAAGAAGCAAGATGACGGTGGCATCTTTCTGAGACTAAGAATTGCAGATAAAGAAGGCCGTATCCGAAATATTCATTTCCCGTTCGACGTAGAGATGGACACAGCACTAAGTGTGGCAACCGAAATGGTTGCAGAACTTGATATTAATGATCAAGATGTGGTCAGAATAGCAGATATGATAGATGGGGAAATTGCTTCCTTGGTACCTGAATGCAGTCCAGGACCAGGGATTGAGGAAACTCCTCGTTTCGTAAATCAAAAGCACTGTCACAATTGGGCGTCGAATCATACATCAAGTGGCTCCTTTATGAATTTTCTGCCACATAATTCGGGTGCCAAGAACCTGCAACTTCTTCCATGTGCTTCAATGCATGGGCGATTTGAGGAGATTATGTTCCAGTCAGAGTATAAAGATCATGTTAGAGAAGATGCTCCAAACACATCAACTCAATCAGACTGCTTGCAGTATCAGGAGTTGTGGAAACAACATGAAAGCCGGGAGATCACTCCTGTAGATTCTGAACGTAGCCATTCTGATGAACAAAATGAACCAGTAGATAAACAAGCAGCAGCAGAAGATAAAGGACAGGTTGGTAGGGAAAATGAAATTGCACCCAACTCGAGCAACCGTCTATCAAATCTATCAGGATCCCATTACTTATCTACAAGTCGTTCACTGTATGTTGACCTTGAGGACAAGTGTGGGAAAGAGATCCAACAGGAACTTAGATGGCTCAGAGCAACGTATCAAATCGAGTTAAGGGAACTCAGAGACCGACAATTTGGGATGACAACAAAGCCTTGGCAAAGTAGTAACAGAAAGCACAACAAAGAATATGGCGCTATGTCGTCAATGGCCCTTTCGCCGAGAGACACATTAAACAGAGGCAACCATGGGATTCACTCAAAATGCTTCACTAACAAGTGGAGTTGTGGTTCTAGTTGCCATTCTCTCGTCAAAACGAAGCGCCCCAATTCGGACGCCCAAAGGGCCCGAACTTGTGAGGCGATGGATTTCGCTGGTGAAGAAGGTGTGGTTAGTAGAAAGAGTTTGTATGAAGGGTCATTGCTTCCTCCCTCTCTTCGCAGGACAGTTTCCCTCCCAGTCGATGCTGTTGATATATAA 2226 0.4236 MNSVAHLEPGYSEFVEVDPTGRYGRYNEILGKGASKIVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHGNIMKFYTSWVDTANRNINFITEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILRGLLYLHSHDPPVIHRDLKCDNIFINGNQGAVKIGDLGLAAILKKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCIIEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVRQFVEKCLATVSLRLSARELLDDPFLQIDDNFSNLALVDNGEFDGLGPFVRHPFLDLHRSYSNLSGEYTNYYGYEAPGYWYSHPGDTEPSGIELFEHLDDDPSEDVDISIRGKKQDDGGIFLRLRIADKEGRIRNIHFPFDVEMDTALSVATEMVAELDINDQDVVRIADMIDGEIASLVPECSPGPGIEETPRFVNQKHCHNWASNHTSSGSFMNFLPHNSGAKNLQLLPCASMHGRFEEIMFQSEYKDHVREDAPNTSTQSDCLQYQELWKQHESREITPVDSERSHSDEQNEPVDKQAAAEDKGQVGRENEIAPNSSNRLSNLSGSHYLSTSRSLYVDLEDKCGKEIQQELRWLRATYQIELRELRDRQFGMTTKPWQSSNRKHNKEYGAMSSMALSPRDTLNRGNHGIHSKCFTNKWSCGSSCHSLVKTKRPNSDAQRARTCEAMDFAGEEGVVSRKSLYEGSLLPPSLRRTVSLPVDAVDI 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0109 741 Gene3D Transferase(Phosphotransferase) domain 1 107 288 - -
Lele07g0109 741 Gene3D Phosphorylase Kinase; domain 1 11 105 - -
Lele07g0109 741 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 376 430 IPR024678 GO:0004674|GO:0005524
Lele07g0109 741 MobiDBLite consensus disorder prediction 531 566 - -
Lele07g0109 741 CDD STKc_WNK 22 281 - -
Lele07g0109 741 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g0109 741 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Lele07g0109 741 Gene3D - 373 438 - -
Lele07g0109 741 MobiDBLite consensus disorder prediction 531 582 - -
Lele07g0109 741 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g0109 741 MobiDBLite consensus disorder prediction 568 582 - -
Lele07g0109 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Lele07g0109 741 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g0109 741 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Lele07g0109 741 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Lele07g0109 741 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0109 Lele-ChrLele07 597397 600251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0109 1 497 MAP Kinase Kinase Kinase AT3G22420 56.458 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele07g0109 Pkinase 5.6e-48 CL0016