Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0097 ATGCAGCTTCCATCGAACCTGTTACCGGACGAGGCGAGCCCGGAGTGGATGAACAAAGGGGACAACGCGTGGCAGCTAACGGCGGCAACGGTGGTGGGCCTCCAAAGCATACCGGGGCTGGTCATCCTCTACGGAAGCCTCGTCAGGAAGACTTGGGCCGTTAACTCTGCTTTCATGGCCTTCTACGCCTTCGCAGCCGTTCTACTGTGCTGGGCTTCTTGGGCTTTCCGAATGTCCTTCGGCGACGAACTAGTTTTCTTCGTGGGAAAACCAGGCGTTGCACTAGAAGAAAAGTTTCTGTTGAAGAAGGCGTTTCTGGGGCTGTTTCCTACTGCCACCATGGTGTTCTTTCAGGGCGTGTTTGCAGGAATTACCTTGATCTTAGTGGCCGGAGCATTACTTGGCCGGATGAACTTTCGAGCATGGATGCTGTTCGTGCCACTCTGGCTCACTTTTTCCTACACCGTCTCTGCCTTTAGTATTTGGTCCCCCAATGGGTGGCTCGCAAAGCAGGGCGTCATTGACTTCTCCGGCGGCTTTGTTATTCATCTCTCTGCCGGCGTTGCTGGCTTCACCGCTGCTTATTGGGTGGGTCCAAGATCAGATGAGGATAGAGAAGCGGGTCCGGAAACACCAAACAACATGATTATGGTGCTCGCCGGAGCGGGGCTGCTGTGGATGGGGTGGAGTGGATTCAACGGTGGAGGTCCATTCGCGGTGAGCACGGTGGCATCTCTGGCCGTGTTCAACACACACGTGTGTGCCGCCACCAGCATCATCGTCTGGGTCATCCTCGACGCCTTCTACTTGGGAAAGCCCACCGTTTTTGGCGCCGTGCAGGGCATGATCACCGGCCTCGTCTGCATCACTCCCGGCGCTGGAGTTGTGCAAGGGTGGGCGGCCATCCTGATGGGATTGATATCTGGAAGCGTTCCCTGGTACACCATGATGATTCTCCATAACAAGGTGAGGTTCTTGAAGAAAATAGACGACCCCATGGCTGTCTTCCACACCCACGCGGTCGCCGGCGTTCTTGGCGGCATCCTCACCGGCTTCTTCGCAGTTCCAAAACTGTGCCGTCTCTTCTTTATGGTGGCCGATTGGGAAAAGTACGTTGGGCTTGCTTATGCGCTTCAGAATGGTTCTGCTCATGCGGGTTTGAGGCAGATGGGGATCCAGCTCGGAGCCATAGGGTTCGTGATATGCTTGAACGTGGTCATCACCAGTTTGATATGCTTGCTGGTGAGGGCCATAGTACCACTTAGAGTAGAGATCCAAGATCTGGCTGTGGGGGACAAGGCGGTCCATGGAGAGGATGCTTTTGCGTTGTGGAGTGCTGAGGGTGGAAGGATTCAGAATCTGAAGCGCAACAAAGTCTTTGATGCCCAAGAGGATTACCCATCATTTGCCTACAAGTCAACGAGCACAATTCAAATGGTCTAA 1443 0.5447 MQLPSNLLPDEASPEWMNKGDNAWQLTAATVVGLQSIPGLVILYGSLVRKTWAVNSAFMAFYAFAAVLLCWASWAFRMSFGDELVFFVGKPGVALEEKFLLKKAFLGLFPTATMVFFQGVFAGITLILVAGALLGRMNFRAWMLFVPLWLTFSYTVSAFSIWSPNGWLAKQGVIDFSGGFVIHLSAGVAGFTAAYWVGPRSDEDREAGPETPNNMIMVLAGAGLLWMGWSGFNGGGPFAVSTVASLAVFNTHVCAATSIIVWVILDAFYLGKPTVFGAVQGMITGLVCITPGAGVVQGWAAILMGLISGSVPWYTMMILHNKVRFLKKIDDPMAVFHTHAVAGVLGGILTGFFAVPKLCRLFFMVADWEKYVGLAYALQNGSAHAGLRQMGIQLGAIGFVICLNVVITSLICLLVRAIVPLRVEIQDLAVGDKAVHGEDAFALWSAEGGRIQNLKRNKVFDAQEDYPSFAYKSTSTIQMV 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0097 480 FunFam Ammonium transporter 6 444 - -
Lele07g0097 480 PRINTS Rhesus blood group protein signature 118 134 IPR002229 GO:0005886
Lele07g0097 480 PRINTS Rhesus blood group protein signature 216 234 IPR002229 GO:0005886
Lele07g0097 480 PRINTS Rhesus blood group protein signature 247 269 IPR002229 GO:0005886
Lele07g0097 480 PRINTS Rhesus blood group protein signature 302 320 IPR002229 GO:0005886
Lele07g0097 480 PRINTS Rhesus blood group protein signature 340 356 IPR002229 GO:0005886
Lele07g0097 480 PANTHER AMMONIUM TRANSPORTER MEP2 4 447 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lele07g0097 480 SUPERFAMILY Ammonium transporter 16 423 - -
Lele07g0097 480 Pfam Ammonium Transporter Family 23 440 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lele07g0097 480 Gene3D Ammonium transporter AmtB like domains 6 458 IPR029020 -
Lele07g0097 480 ProSitePatterns Ammonium transporters signature. 175 200 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0097 Lele-ChrLele07 545385 547025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0097 112 471 Inorganic Solute Cotransporters AT2G38290 53.315 3.30e-124 364