Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0088 ATGACGGGATTGAAAGAGGCAGAGCCAGACAAGTACAGCATGATTAATTTCGAAGAGACCGAGTTACGACTCGGATTGCCCGGTGCTCCGTCCGCGGCCAACACCGACGCCGACTCTGCCATCAAGACCACCTGGTCTACTGGTGGCAAGAGAGGCTTCTCCGACACCGCTGTGGATTTGAAGCTCAATCTCTGTTCCAACAGTACTTCCCAGTCAACCCACAGGCCGACCGACAACACAACTGCCGCTTCTCCCTCTAACGATCCCGCGAAGCCACCCGCCAAGGCACAAGTAGTGGGTTGGCCACCGGTGCGATCATCGAGGAAGAACATCGGGACATCGCAGAGCCAGAAGAATAACAAGGAAGAAGGTGCGACGTTCGTGAAGGTGAGCATGGACGGTGCTCCTTATCTGCGCAAAGTGGACTTGAAATTGTACAAGAGCTACCAACAGCTGTCTGAGGCGCTCGCTAAAATGTTCAGCTCCTTCACCAGCGCCAATTATGGCTCTCCTCAGGCCACCAACGACTTCCTCAACGAGAGCAAATTGATCGATCTCTTGAACGGCACCGACTACGTCCCCACTTACGAAGACAAAGACGGTGATTGGATGCTCGTCGGCGACGTCCCCTGGGAAATGTTCGTGGAATCCTGCAAACGCCTCCGCATCATGAAAGGATCCGACGCAATTGGGCTAGGTCAGTCACAGACTCTTTAA 717 0.5411 MTGLKEAEPDKYSMINFEETELRLGLPGAPSAANTDADSAIKTTWSTGGKRGFSDTAVDLKLNLCSNSTSQSTHRPTDNTTAASPSNDPAKPPAKAQVVGWPPVRSSRKNIGTSQSQKNNKEEGATFVKVSMDGAPYLRKVDLKLYKSYQQLSEALAKMFSSFTSANYGSPQATNDFLNESKLIDLLNGTDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSDAIGLGQSQTL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0088 238 MobiDBLite consensus disorder prediction 36 51 - -
Lele07g0088 238 SUPERFAMILY CAD & PB1 domains 115 225 - -
Lele07g0088 238 MobiDBLite consensus disorder prediction 26 52 - -
Lele07g0088 238 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 16 231 IPR003311 GO:0005634|GO:0006355
Lele07g0088 238 MobiDBLite consensus disorder prediction 67 87 - -
Lele07g0088 238 MobiDBLite consensus disorder prediction 107 124 - -
Lele07g0088 238 MobiDBLite consensus disorder prediction 67 124 - -
Lele07g0088 238 ProSiteProfiles PB1 domain profile. 125 226 IPR000270 GO:0005515
Lele07g0088 238 FunFam Auxin-responsive protein 120 236 - -
Lele07g0088 238 Pfam AUX/IAA family 19 233 IPR033389 -
Lele07g0088 238 Gene3D - 119 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0088 Lele-ChrLele07 505552 507507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0088 113 223 B3 DNA Binding Superfamily AT3G61830 29.730 4.70e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele07g0088 AUX_IAA 8.6e-80 CL0072