LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele07g0081	ATGCTTTCAAAACTAAGACACAGGCATTTGGTGTCCTTGATTGGGTTCTGCGAGGAGCATAATGAGATGTGCCTGGTTCATGACTACATGGCACGTGGCACCCTAAGGGAGCATCTATACAAGGGCAACAAATCTCCATCTACTTTGTCGTGGAAGCAAAGGTTGGAGATTTGCATTGGAGCTGCAAGAGGGCTTCACTACCTTCGCACCTGGGCTAAGTACACCATCATTCACAGAGATGTCAAGTCAGCTAACATTCTATTAGATGAGAATTGGACTGCCAAGGTTTCAGATTTTGGGTTATCAAAAACCGGTCCGGACATGAAAAATGGGCATGTTAGTACGGTTGTAAAGGGAAGCTTTGGATATTTGGACCCTGAATATTTTAGGAGACAACAGTTAACTGAAAAGTCCGATGTGTATTCGTTTGGGGTGGTCTTGTTTGAGGTTCTGTGCGCCAGGCCTGTTTTGAATGCGAACCTTCCAAAGGAACAGGTGTCTCTTGCGGATTGGGCTTGGAGCTGCAAGAGAAAAGGGAGGTTGGAGGATATCATTGACCCAAATCTGAAAGGAAAGATCAATCCAGAAAGTTTGAGCAAGTTTGCAGACGCGGCAGAGAAGTGCTTGAGCGATCATGGAGTTGCCCGACCCTCGATGAATGATGTGTTGTGGAATCTAGAACTTGCTCTTAACCTCCAAGAAAACCCAAATGGGTCGAATTATCCTTCGAAAGCGGAGGAAAGTGAGTTGGAAGAAGTGAGCCTGATAGACAACGACGTGGGAAAGCACGAGACAAGCCAAGATTCTGGCGATACTTCATCTGCTATCTTCTCACAAATCGTCAATCCTACAGGGCGATGA	861	0.4599	MLSKLRHRHLVSLIGFCEEHNEMCLVHDYMARGTLREHLYKGNKSPSTLSWKQRLEICIGAARGLHYLRTWAKYTIIHRDVKSANILLDENWTAKVSDFGLSKTGPDMKNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVLNANLPKEQVSLADWAWSCKRKGRLEDIIDPNLKGKINPESLSKFADAAEKCLSDHGVARPSMNDVLWNLELALNLQENPNGSNYPSKAEESELEEVSLIDNDVGKHETSQDSGDTSSAIFSQIVNPTGR	286

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele07g0081	286	MobiDBLite	consensus disorder prediction	245	266	-	-
	Lele07g0081	286	Gene3D	Phosphorylase Kinase; domain 1	1	30	-	-
	Lele07g0081	286	SUPERFAMILY	Protein kinase-like (PK-like)	2	228	IPR011009	-
	Lele07g0081	286	MobiDBLite	consensus disorder prediction	267	286	-	-
	Lele07g0081	286	Pfam	Protein tyrosine and serine/threonine kinase	1	221	IPR001245	GO:0004672\|GO:0006468
	Lele07g0081	286	FunFam	Receptor-like protein kinase FERONIA	30	248	-	-
	Lele07g0081	286	SMART	serkin_6	1	229	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele07g0081	286	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	76	88	IPR008271	GO:0004672\|GO:0006468
	Lele07g0081	286	ProSiteProfiles	Protein kinase domain profile.	1	228	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele07g0081	286	PANTHER	OS07G0166700 PROTEIN	1	233	IPR045272	GO:0004714\|GO:0006468
	Lele07g0081	286	Gene3D	Transferase(Phosphotransferase) domain 1	31	249	-	-
	Lele07g0081	286	MobiDBLite	consensus disorder prediction	236	286	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele07g0081	Lele-ChrLele07	471533	472393	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele07g0081	1	286	Receptor kinase-like Gene Family	AT3G51550	64.013	8.74e-129	385

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Lele07g0081		PK_Tyr_Ser-Thr	1.4e-37	CL0016