Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0080 ATGGCCACCTCTGTTCAGCCTAAGCCTAAGAAATCTGCAGTCGTGAGGAAACTCAAATCCTCGCCCTCACACCCTCCTTTCGCTGAGATGATCACGGATGCGATCTTAAGTCTCAAAGAGAGGACCGGTTCCAGCCAGTATGCCATTACCAAGTTCATCGAGGAGAAGCACAAGCAGTTGCCTCCCACATTCAAGAAACTCTTGCTCAACAATCTGAAGAAGTCGGTGGCCGCTGGCAAACTCGTCAAGGTCAAGAACTCCTTCAAGCTTGCGTCCAAAACACCGGCTCCTGCTGCTACGAAGCCCCCAAAACCCACCGTCAAGGCCGTACCTACGAAGCCCTCTGCTAAATCAAAAGTAGCAGTTAAGCCTAAAGCCGTTCCCAAATCCAAACCCGCTGCTGCAAGAAGTGCGAAAGCGACTTCGAGGCCGGCTAAGACGTCGGCCAGGACCTCGCTAGGGAAGAGGGTAGCTAAGGCTGCAAAGAGTGTGAAAAAGCCCAAGAGTGTGAAATCGCCAGCCAAAAAAGAGACTGTCAAGAAGGCCAAGAAGAAGTAA 558 0.5161 MATSVQPKPKKSAVVRKLKSSPSHPPFAEMITDAILSLKERTGSSQYAITKFIEEKHKQLPPTFKKLLLNNLKKSVAAGKLVKVKNSFKLASKTPAPAATKPPKPTVKAVPTKPSAKSKVAVKPKAVPKSKPAAARSAKATSRPAKTSARTSLGKRVAKAAKSVKKPKSVKSPAKKETVKKAKKK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0080 185 MobiDBLite consensus disorder prediction 91 185 - -
Lele07g0080 185 SMART h15plus2 21 87 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lele07g0080 185 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 23 92 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lele07g0080 185 CDD H15 21 103 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lele07g0080 185 PANTHER HISTONE H1 8 183 - -
Lele07g0080 185 Pfam linker histone H1 and H5 family 24 91 IPR005818 GO:0000786|GO:0003677|GO:0006334
Lele07g0080 185 SUPERFAMILY "Winged helix" DNA-binding domain 20 104 IPR036390 -
Lele07g0080 185 PRINTS Histone H5 signature 119 133 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Lele07g0080 185 PRINTS Histone H5 signature 10 31 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Lele07g0080 185 PRINTS Histone H5 signature 37 54 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Lele07g0080 185 PRINTS Histone H5 signature 150 167 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Lele07g0080 185 PRINTS Histone H5 signature 172 185 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Lele07g0080 185 Gene3D - 18 102 IPR036388 -
Lele07g0080 185 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0080 Lele-ChrLele07 467918 468562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0080 1 95 Single Myb Histone (SMH) Gene Family AT1G49950 32.673 6.01e-09 52.4