Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0062 ATGAAACCTCTGGTTTCTTTTTCCTCTACTGCACGAGACCTAACTGCTAATCCTGCCTCAGTGCAGGCTGCTTCATCAAATTCGAACCTCAGAAGTGGTGGGCACATGTTTTCATCACCTTCTAAATGCCTGAATGACATCTCTTTTTCCTCAATTTCACAACATGATAGGCAGTATCAAGATTCTCCGTTCATTTCTAAGTCATTGAGAAGAGATGATGTGATGCCACGGCTAGGAGCTTCCCTTACTCACAGTGGGGAAGATGCGTCCTTCCCACCTTCACATTCTTCTCATCCAGAAATACATTCGGCAGCATTCATTTCTCAATCCCCGGAAAGTGATGATATTTCCTGGGGACCAGATCCCTTTCAGGATATTCTTAATCTCTCTGTAAACGACTCCAGCCGGAATGATCAGATGGAAAATAGTTCTTGTTATATGTCTGATGACTACACCAAAAAAACTGATTTTGGGGAGTGGGTAGATCAGTTAATATCAGTTGATGAATCTCCTCATCCAAACTGGAGCCAGCTTCTTGTTGATGATAACGGGCCTGATTCTAAATCAAAGGAGACCCATGCCACCAAACAGCAGCATGCACCATCTGGAGAAGTTAATGCTCCTCCTACTTCTGCCTCGAGTGCACTGCAAAGTAAGCCTAGAATGCGTTGGACTCCAGAACTTCATGAAGCTTTTGTGGAAGCAGTGAATAAGCTTGGTGGTAGCGAGAAGGCTACTCCAAAGGGTGTTTTGAACTTAATGAAATTTGAGGGTCTTACTATCTATCATGTGAAAAGCCATCTACAGAAGTATAGAACAGCCAGATTCAAACCCGAATCATCAGGAGGAGCTTCTGAGAAGAAGTCATCGGCCAAAGAAATGAAATCTTCAGACTTGACAGCCATGGGGATTACTGAAGCATTGCGGTTGCAGATGGAACTCCAGAAGCGGCTTCATGAACAACTTGAGATTCAAAGAAGGCTGCAGCTTCAAATAGAAAACCAAGGGAAGCGTCTTCAGATGATGTTTGAGAAACAAAGAGAGATGGAGGACTGCAAGCACAAGACATCCTCCCCCTCCTCCCTGGACAGGCCCACGGTACTAACTTCCCCCACAATTGAGGGTCAAGAAACCTTAAACGAGGGTCAAGAAAAATCTGGAATCGGCAATATCAATGCAACAACCATGGGCGAAGAATGCTCTGAGGATGCCTGCACAAATCAGGAGGTGGAAGAAACTAAAGTTATTAATGAAGAAGAGGTGGGGCATGATCAGTTGGATGCACCAGCCTCCAAACGGGTGAAAAGTAGATAA 1314 0.446 MKPLVSFSSTARDLTANPASVQAASSNSNLRSGGHMFSSPSKCLNDISFSSISQHDRQYQDSPFISKSLRRDDVMPRLGASLTHSGEDASFPPSHSSHPEIHSAAFISQSPESDDISWGPDPFQDILNLSVNDSSRNDQMENSSCYMSDDYTKKTDFGEWVDQLISVDESPHPNWSQLLVDDNGPDSKSKETHATKQQHAPSGEVNAPPTSASSALQSKPRMRWTPELHEAFVEAVNKLGGSEKATPKGVLNLMKFEGLTIYHVKSHLQKYRTARFKPESSGGASEKKSSAKEMKSSDLTAMGITEALRLQMELQKRLHEQLEIQRRLQLQIENQGKRLQMMFEKQREMEDCKHKTSSPSSLDRPTVLTSPTIEGQETLNEGQEKSGIGNINATTMGEECSEDACTNQEVEETKVINEEEVGHDQLDAPASKRVKSR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0062 437 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 216 276 IPR017930 -
Lele07g0062 437 Pfam MYB-CC type transfactor, LHEQLE motif 302 348 IPR025756 -
Lele07g0062 437 MobiDBLite consensus disorder prediction 1 37 - -
Lele07g0062 437 Coils Coil 305 325 - -
Lele07g0062 437 MobiDBLite consensus disorder prediction 171 219 - -
Lele07g0062 437 SUPERFAMILY Homeodomain-like 217 273 IPR009057 -
Lele07g0062 437 Gene3D - 218 277 - -
Lele07g0062 437 MobiDBLite consensus disorder prediction 353 437 - -
Lele07g0062 437 FunFam Myb family transcription factor 218 276 - -
Lele07g0062 437 MobiDBLite consensus disorder prediction 359 402 - -
Lele07g0062 437 MobiDBLite consensus disorder prediction 80 100 - -
Lele07g0062 437 MobiDBLite consensus disorder prediction 273 297 - -
Lele07g0062 437 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 219 273 IPR006447 GO:0003677
Lele07g0062 437 Pfam Myb-like DNA-binding domain 221 272 IPR001005 -
Lele07g0062 437 MobiDBLite consensus disorder prediction 8 37 - -
Lele07g0062 437 MobiDBLite consensus disorder prediction 198 219 - -
Lele07g0062 437 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 196 408 IPR044848 GO:0003700
Lele07g0062 437 MobiDBLite consensus disorder prediction 407 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0062 Lele-ChrLele07 371815 374280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0062 14 362 G2-like Transcription Factor Family AT3G04450 43.666 9.25e-75 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele07g0062 Myb_DNA-binding 7.9e-09 CL0123