Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0056 ATGATGGTTAGATTAAGCAGAGCACTATATGGGGTTGGTTGGTTTGGTAATGGTAGGCCTAATAATGGGTTTGCTCTCAAGGCCCTCGAAATCAAGCCCTGGGCAACAGCTTTGATTTTAACAAGATGGGCTTATGAGTTGACTCATGGGGCAAAAGAAAAGCTTCCTGCGAAATCGGTTCCTTCCCTGATGTTTCCTGCGCCATGTCGCCAAGTCCCCAATGACGTGATGCCTTTTGAGTTTTTCCAGATTCAATGTTTGGGGGAATTCATTCGGTGGAATATTCGTAGGATTTTGACTTTGGCTTTAGAGGAGCCTTCACTATTCGAGCGAAGCAACCGAGAAGCTGAGACCACAGTGACAACTCTTAGTCATTCTCCACTTCATTATTCATCCATATGCAATTATACTTCAGGTGGTGGCCCATCTCGCTCGCGATCGCCATGCAAGTTATTGCAGAGGAGCTGGGTTCTGGGGATGACGAGGACTCCTTGCTGTGAGAAGATGGGATTGAAGAAGGGACCGTGGACTCCTGAAGAAGATCAGATTCTGATCTCTTATATTCAACGATATGGCCATGGAAACTGGCGGGCTCTTCCTAAACAGGCTGGTTTATTGAGGTGTGGAAAGAGTTGTAGGCTTCGGTGGATAAATTACTTGAGACCGGATATAAAACGAGGGAAATTCAGCAAGGAAGAAGAAGAAACCATCCTCAAGCTGCATCAAATTCTTGGGAATAGATGGTCTGCTATCGCTGCGAGATTACCAGGACGAACAGATAACGAAATAAAGAATTTTTGGCACACCCACCTGAAGAAGAGGCTCGAAAGATGCGAATTGCGTAATGTGAGTGCGTCCTCTTCAAGTAAAGAGGTGGTGATGCCGCCTGTGCAGCAGGTAGTAGTGGCGGCGGAGTCATCAATTGCTGCTAATTATCTTGGTTTCACCGGCAAGGTTCAGAAGAGTGCCAATGAGGGTTTAGCGTCAAGGAAATATGCGGCCTCTGTAGATTCAGGATTTCATGCTGCATCTGGGGAAACCCTAGGCGGCCATAGATCTAACAAGATCAGCGAAGAAATGGAATTTTGGTATGATCTATTCATGAAAGCCGGACAGCCGACGCTTGGGCATGCAAATCTTGGATAG 1146 0.4651 MMVRLSRALYGVGWFGNGRPNNGFALKALEIKPWATALILTRWAYELTHGAKEKLPAKSVPSLMFPAPCRQVPNDVMPFEFFQIQCLGEFIRWNIRRILTLALEEPSLFERSNREAETTVTTLSHSPLHYSSICNYTSGGGPSRSRSPCKLLQRSWVLGMTRTPCCEKMGLKKGPWTPEEDQILISYIQRYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEETILKLHQILGNRWSAIAARLPGRTDNEIKNFWHTHLKKRLERCELRNVSASSSSKEVVMPPVQQVVVAAESSIAANYLGFTGKVQKSANEGLASRKYAASVDSGFHAASGETLGGHRSNKISEEMEFWYDLFMKAGQPTLGHANLG 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0056 381 FunFam MYB transcription factor 228 275 - -
Lele07g0056 381 Gene3D - 228 275 - -
Lele07g0056 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 221 275 IPR017930 -
Lele07g0056 381 FunFam MYB-related transcription factor 172 225 - -
Lele07g0056 381 SUPERFAMILY Homeodomain-like 169 267 IPR009057 -
Lele07g0056 381 ProSiteProfiles Myb-like domain profile. 221 271 IPR001005 -
Lele07g0056 381 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 160 317 - -
Lele07g0056 381 SMART sant 172 222 IPR001005 -
Lele07g0056 381 SMART sant 225 273 IPR001005 -
Lele07g0056 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 168 220 IPR017930 -
Lele07g0056 381 Gene3D - 172 225 - -
Lele07g0056 381 ProSiteProfiles Myb-like domain profile. 168 220 IPR001005 -
Lele07g0056 381 CDD SANT 175 220 IPR001005 -
Lele07g0056 381 Pfam Myb-like DNA-binding domain 226 271 IPR001005 -
Lele07g0056 381 Pfam Myb-like DNA-binding domain 173 220 IPR001005 -
Lele07g0056 381 CDD SANT 228 271 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0056 Lele-ChrLele07 348293 353322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0056 160 367 MYB Transcription Factor Family AT2G31180 48.739 4.04e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele07g0056 Myb_DNA-binding 3.3e-15 CL0123