Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0053 ATGGGGACAGAACTCATGAGAACATGTGTTCAAGAAGAGAACGATGAGTTTCCATCAGTTCCACCTGGCTTTGAGTCATATACATCTTCCTCACTGAACAGTGGGGAAGGCATTGAGAAACAGAATGATAAAAACATGATTAGTTTTTCGGTCTCTGCAAGTGTTTCTAATTGTAAATCACAGTCAATTCAGGGGAAAACTGATGTTCAAGTTAGTGATACTGCAAAGGTTCCTAGGTCCCTTCGACGAAGACGATGGATCAACCATGGACAATATGATAACAGTTCAGAGGAAGACTCTGATTCTGAGCGGCTTGATCAAAATTTTTCGTCAGCGCCTTGTCTTCCAAAGGGAGTTATCCGTGGATGTCCAGATTGCAGTAATTGCCAAAAGGTTATTGCCAGATGGAGACCAGAAGATGCTTGCAGGCCCACCCTTGAGGATGCTCCTGTTTTTTACCCAACTGAAGAGGAGTTCAAAGATAACATGAAATATATAGCAAGTATTTGTTCCAGAGCAGAACCATATGGCATTTGTCGCATTGTTCCCCCTTCATCTTGGAAGCCCCCTTGTCCTCTTAAGGAAAAGACTATATGGGAGGGTTCTAAATTTGCTACTCGTGTTCAGAGGATTGATAAGCTTCAGAACCGTGATTCAATGAGAAAGATGTCAAGGATTCATTTTAATACTAGACGGAAAAGGAAAAGATGCCCTAGAATGGGATTGGATAATGGCAGTAATAGAGGACCTAATGCAGGATTTTGTGAGATTGAAAGGCCCTTTGGGTTTGAACCTGGCCCAGAATTTACTTTGGAAACATTTCAGAGATATGCGGATGAATTTAAGGACAGATACTTCAGAAAGAATGAGAGTATATCCAATATGGGAGGTAACACAACAATGTCAAAAGGATGGGAGCCTCCTGTGGAGAACATAGAGGGTGAATATTGGCGAATGGTGGAGAGACCTACTGAAGAAATTGAGGTGCTTTATGGAGCTGACCTGGAAACTGGGGTTTTTGGGAGTGGTTTTCCCAGAAAGCTTAGTGAAGTTGGTTCTGATTCACACAAAGAGTACACAAAGTCTGGCTGGAATTTAAATAACTTTGCCAGGCTTCCTGGATCTCTACTTTCATATGAAAGCAGCGATATATCTGGTGTCCTTGTGCCCTGGTTGTATATAGGAATGTGCTTTTCTTCCTTTTGTTGGCATGTGGAGGATCACCATTTATATTCTTTGAATTACATGCATTGGGGTGCTCCAAAAATGTGGTATGGTGTCCCTGGCAAATATGCTTGCAAATTGGAAGAGGCCATGAGAAAGCATTTACCAGACCTTTTTAAAGAGCAACCTGATTTGCTTCATAAGCTGGTCACTCAGCTTTCTCCTTCTATCCTTAAGTCTGAAGGAGTACCTGTCTATAGGTGTGTCCAGAACGCTGGAGAGTTTGTTCTGACATTCCCTCGAGCTTATCATTCTGGATTGAATTGTGGCTTCAACTGTGCAGAGGCTGTAAATGTAGCTCCAGTTGACTGGCTGCCCCATGGGCAGATTGCCATTGAGCTATACCGGGAGCAAGGACGTAAGACTTCTATATCTCACGATAAACTGTTGCTTGGGGCTGCTAGGGAAGCAGTACGATCACTGTGGGAGCTTAATCTGCTGAAGAAGAATACTTCAGATAATCTAGGATGGAAAGGTGTTTGTGGAAAAGATGGCATTCTAGCAAAAGCACTCAAGACACGCGTTGAGATGGAACAAGTAAGGAGGAAATTTCTCTGCAGTTCTTCGCAGGCACTGAAAATGGAGAGCAGTTTTGATGCCACAAGTGAAAGGGAATGCAGTGTTTGCTATTTTGATCTACACTTATCCGCAGCTGGTTGCCACTGTTCCTCTGACCGATATGCTTGCTTGGATCATGCAAAACAGTTCTGTTCATGTGCTTTGGATTCCAAATTCTTTCTCTTCCGTTATGATATTAGTGAATTATTTATCCTTGTTGAGGCCTTGGAAGGAAAATTAAGTGCAGTATACAGATGGGCAAAATTAGATCTTGGGCTGGCACTAACTTCTTCTATATCAAAAGACAAAAGTCAATGTAGCAACTTGATTCAGCCTTCAAAGGAAACAATGCTTCACAAATTTAGATTAGATACCTCAGATCTGTCTGGTTCTTCTTGTGGCACTATGCTTAAAGAGATGACATTGCATCCTTCAGTTGTTGCTATTGAAGATTCTCACTTGATAGATGTCCCGATAGAGAATCTGATGACTTCCTCAAAAAGCACTGATCAGGGTTTTATAAAACTAAGAAAATCAGCAGAAGATGCAATTCCCTTGGGTTATTCAAAAGAACCGTCTACATCTAATAGCTGGACAACCCCAAGTGAGATGACTAGTCATGAAAGATATTCCGAGAAACAATCAATCATTTGCAAATCTTCTGCCAGGAACCCTGTTCGTCAGTTGCCTGTAGGGGACACTTCATATTCTTTACCTCTTACTTTTGCTGAACATGGAGCTAAGAAAACTCCTTGTGGGCACGATAATATTATACTTCTTAGTGATGACGAAACTGATGAACCTAAGATGACGGAAACAGATAACAAGAAGGAGCTTTCTCAAAGGCTTGTAGGTTCTTGTGATAATCTAAACCCGTCTAATTTTAAAGAAGATCCCGACGGGACTATCCCTGTCACAGATACTGCTTTAAAGGTTGGGAATGATGTGCCTCATGAAAATATGAGTTCTCATTCAACTTATCATTTGCACGTGAAACAGGAACATGATATAATTAAGGGAGCAGTTTTAGATTCTACTCCAGTAGATTTTTCCTGCAATATAGGTTATGGTAGTGCAGAATCAGTCAGACAAATTCAGGCTTCCTCAACAGGAGAGAGTAGAGATCATTGTCTGGATTCTTCTGGGAGTTTTCCTCTGAATCCACAGCATTCTGGGACTGTCAAGGCTAAGAACGACGGCAACCATGAGAAGATTGGAGTATGTAGTACAGATAATGGTAGAGCTGCTAATGGAAACCTGTCTGGCAGTCCAAACAATTTGGGAAGATACTATCGTCAGAAAGGTCCTCGTATAGCAAAGGTTGTCCGGCGGATCAACTGCAATGTTGAGCCTCTAGAATTTGGTATTGTGTTTTCTGGAAAGTCATGGTGCAACAGTCAGACTATATTTCCAAAGGGATTTAGAAGCCGTGTAAGATACATAAATGTCTTAGATCCAACAAGCATGTGTTATTATATTTCAGAAATTCTTGATGCTGGACGTGATGGGCCTCTGTTTATGGTCTCCCTGGAACATCACCGAAGTGAGGTCTTCATTCATCTTTCTGCTGGTAGATGCTGGGAACTGGTAAGAGAGAGAGTGAATCAGGAGATCACAAAGCAACATAAGCTGGGAAAAAAGGACCTTCCTCCTTTGCAGCCACCTGGCAGCATTGATGGCTTTGAAATGTTTGGGTTATCTTCGCCTGCAATAGTGCAGGCTATCGAGGCATTGGATCAAAATCGTGTCTGCAAGGAATATTGGGATTCGCGGCCCTATTCACGTCCTCTAGGGCAAATTCAGCAAGCTTCACAGTCCAAAGAAAATGGTGAAAGCGCGAATGGGCCATTCCAGGGGGGAAATGTTCAAGGGGCCCACAGAAATGAGGTCATTCCTGTTGGAATAGATGCCGTATTAAGGAGCCTGTTAAAAAAAGCCGATGCACAAGAATTGAACTCATTGTGCAGCATTCTTTGTGACAATACCAATACCAATACCGCAGCTGAGGGCAGCCAAATTGTTCAACTTCTCAATGAAGAGATCAGAAAAAATAGGCAGCTGGGTGGGGTGAAAATCACTGGACACCTCTGGTATGATGGCTATATACGAAGATCTGAGAGGAGTGCTGGCCTTGTAGTTTTCTGTTCCAGCTTTGTTGTGTATTATACAGTTAGGTTAGAGTTAATTGACAATCATTCATGTTGGGAGATGATGTTAACCGAGCAATTGTCGTTAGAATAA 4023 0.4213 MGTELMRTCVQEENDEFPSVPPGFESYTSSSLNSGEGIEKQNDKNMISFSVSASVSNCKSQSIQGKTDVQVSDTAKVPRSLRRRRWINHGQYDNSSEEDSDSERLDQNFSSAPCLPKGVIRGCPDCSNCQKVIARWRPEDACRPTLEDAPVFYPTEEEFKDNMKYIASICSRAEPYGICRIVPPSSWKPPCPLKEKTIWEGSKFATRVQRIDKLQNRDSMRKMSRIHFNTRRKRKRCPRMGLDNGSNRGPNAGFCEIERPFGFEPGPEFTLETFQRYADEFKDRYFRKNESISNMGGNTTMSKGWEPPVENIEGEYWRMVERPTEEIEVLYGADLETGVFGSGFPRKLSEVGSDSHKEYTKSGWNLNNFARLPGSLLSYESSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKYACKLEEAMRKHLPDLFKEQPDLLHKLVTQLSPSILKSEGVPVYRCVQNAGEFVLTFPRAYHSGLNCGFNCAEAVNVAPVDWLPHGQIAIELYREQGRKTSISHDKLLLGAAREAVRSLWELNLLKKNTSDNLGWKGVCGKDGILAKALKTRVEMEQVRRKFLCSSSQALKMESSFDATSERECSVCYFDLHLSAAGCHCSSDRYACLDHAKQFCSCALDSKFFLFRYDISELFILVEALEGKLSAVYRWAKLDLGLALTSSISKDKSQCSNLIQPSKETMLHKFRLDTSDLSGSSCGTMLKEMTLHPSVVAIEDSHLIDVPIENLMTSSKSTDQGFIKLRKSAEDAIPLGYSKEPSTSNSWTTPSEMTSHERYSEKQSIICKSSARNPVRQLPVGDTSYSLPLTFAEHGAKKTPCGHDNIILLSDDETDEPKMTETDNKKELSQRLVGSCDNLNPSNFKEDPDGTIPVTDTALKVGNDVPHENMSSHSTYHLHVKQEHDIIKGAVLDSTPVDFSCNIGYGSAESVRQIQASSTGESRDHCLDSSGSFPLNPQHSGTVKAKNDGNHEKIGVCSTDNGRAANGNLSGSPNNLGRYYRQKGPRIAKVVRRINCNVEPLEFGIVFSGKSWCNSQTIFPKGFRSRVRYINVLDPTSMCYYISEILDAGRDGPLFMVSLEHHRSEVFIHLSAGRCWELVRERVNQEITKQHKLGKKDLPPLQPPGSIDGFEMFGLSSPAIVQAIEALDQNRVCKEYWDSRPYSRPLGQIQQASQSKENGESANGPFQGGNVQGAHRNEVIPVGIDAVLRSLLKKADAQELNSLCSILCDNTNTNTAAEGSQIVQLLNEEIRKNRQLGGVKITGHLWYDGYIRRSERSAGLVVFCSSFVVYYTVRLELIDNHSCWEMMLTEQLSLE 1340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0053 1340 MobiDBLite consensus disorder prediction 780 806 - -
Lele07g0053 1340 MobiDBLite consensus disorder prediction 87 105 - -
Lele07g0053 1340 Gene3D - 1043 1179 - -
Lele07g0053 1340 MobiDBLite consensus disorder prediction 23 41 - -
Lele07g0053 1340 MobiDBLite consensus disorder prediction 783 799 - -
Lele07g0053 1340 PANTHER LYSINE-SPECIFIC DEMETHYLASE 141 1175 - -
Lele07g0053 1340 Pfam jmjN domain 150 183 IPR003349 -
Lele07g0053 1340 ProSiteProfiles JmjC domain profile. 361 524 IPR003347 -
Lele07g0053 1340 Pfam C5HC2 zinc finger 614 663 IPR004198 -
Lele07g0053 1340 SMART fyrn_3 1049 1093 IPR003888 GO:0005634
Lele07g0053 1340 ProSiteProfiles FYR domain FYRC motif profile. 1095 1185 IPR003889 GO:0005634
Lele07g0053 1340 FunFam Putative lysine-specific demethylase JMJ16 1041 1179 - -
Lele07g0053 1340 MobiDBLite consensus disorder prediction 1192 1215 - -
Lele07g0053 1340 SMART cupin_9 358 524 IPR003347 -
Lele07g0053 1340 SUPERFAMILY Clavaminate synthase-like 325 551 - -
Lele07g0053 1340 Gene3D Cupin 134 508 - -
Lele07g0053 1340 Pfam F/Y-rich N-terminus 1049 1090 IPR003888 GO:0005634
Lele07g0053 1340 Pfam JmjC domain, hydroxylase 391 507 IPR003347 -
Lele07g0053 1340 SMART fyrc_3 1099 1193 IPR003889 GO:0005634
Lele07g0053 1340 ProSiteProfiles JmjN domain profile. 149 190 IPR003349 -
Lele07g0053 1340 MobiDBLite consensus disorder prediction 12 41 - -
Lele07g0053 1340 ProSiteProfiles FYR domain FYRN motif profile. 1035 1093 IPR003888 GO:0005634
Lele07g0053 1340 SMART JmjN_1 148 189 IPR003349 -
Lele07g0053 1340 Pfam F/Y rich C-terminus 1097 1181 IPR003889 GO:0005634
Lele07g0053 1340 MobiDBLite consensus disorder prediction 87 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0053 Lele-ChrLele07 317972 330511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0053 1 1279 JUMONJI Transcription Factor Family AT1G08620 53.195 0.0 1217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lele07g0053 JmjC 4.3e-46 CL0029