Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0045 ATGAAAGCAGGTCGAATAGTGATGGAGCTATTTGCAGATGTCGCCCCAAAGACAGCTGAAAACTTCCGAGCTCTCTGCACTGGTGAAAAGGGGATCGGCATATGTGGGAAGCCTTTACATTACAAAGGGTCCACATTTCACCGAATTATTCCACAGTTCATGTTACAGGGAGGAGATTTCACTAGAGGAAATGGAACTGGTGGGGAGTCAATTTATGGCGCAAAATTTGCTGACGAGAATTTCAAGCTGAAGCATACGGGGCCTGGCATTCTCTCAATGGCAAATGCCGGTCCCAATACAAATGGTTCTCAGTTCTTTATTTGCACTACGAAGACTGAATGGCTTGATGGAAAGCATGTTGTATTTGGAAAAGTTGTTGATGGCTACGGTGTAGTTAAGGAAATGGAGAATGTGGGTTCCCAGGGTGGGAGGACCTCAGAACCCGTTGTAATTGAAGATTGTGGTCAGATAGCAGACAACTGA 483 0.4534 MKAGRIVMELFADVAPKTAENFRALCTGEKGIGICGKPLHYKGSTFHRIIPQFMLQGGDFTRGNGTGGESIYGAKFADENFKLKHTGPGILSMANAGPNTNGSQFFICTTKTEWLDGKHVVFGKVVDGYGVVKEMENVGSQGGRTSEPVVIEDCGQIADN 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0045 160 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 41 58 IPR020892 GO:0003755|GO:0006457
Lele07g0045 160 SUPERFAMILY Cyclophilin-like 2 157 IPR029000 -
Lele07g0045 160 FunFam Peptidyl-prolyl cis-trans isomerase 1 158 - -
Lele07g0045 160 CDD cyclophilin_ABH_like 2 155 - -
Lele07g0045 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 46 58 IPR002130 GO:0000413|GO:0003755
Lele07g0045 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 10 25 IPR002130 GO:0000413|GO:0003755
Lele07g0045 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 132 IPR002130 GO:0000413|GO:0003755
Lele07g0045 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 89 104 IPR002130 GO:0000413|GO:0003755
Lele07g0045 160 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 104 116 IPR002130 GO:0000413|GO:0003755
Lele07g0045 160 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 156 IPR002130 GO:0000413|GO:0003755
Lele07g0045 160 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 2 157 - -
Lele07g0045 160 Gene3D - 1 160 IPR029000 -
Lele07g0045 160 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 155 IPR002130 GO:0000413|GO:0003755
Lele07g0045 160 PIRSF Peptidylpro_ismrse 1 160 IPR024936 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0045 Lele-ChrLele07 283074 283556 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0045 4 138 U-box Gene Family AT5G67530 50.735 1.80e-33 122