Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0032 ATGGCAAAGACTGGCGTCTTTGAAAACGACTCAACTTTGCTTCCCCATGCAAAGGCCTTGGATTTGAAGCACCAAATGCGGGGGCTCGTCAATATCATCCTGGACGCCGATGATTTCCCGCTGGCCGCACTTGACGAAGCTATTACAACTCTTTCTGCTCTCAAGGATTTGAAATGTAAATCCACCGGCTCCTTCCCTCACAAATTCCATCATTTGTCTGTTCCCCCGGAATTTCGATGCCCCATATCTCTAGAGCTAATGAGTGATCCTGTTATCCTGGCCACCGGACAGACTTATGATCGGCCATTTATCCAAAGATGGTTAAATGAAGGCCACAGGACATGCCCTCAAACTCAGCAAGTCCTTTCTCACTCCATCCTTACTCCAAATCATCTGGTCCGTGACATGATTTCACATTGGTGCAAGGAGAACGGAGTTGAGTTGCCTAAGCCTGTTTGGGACATTGATGAAGAAGTAATAACTGGTGCAGACAGAAGCCATTTGAATTCATTGCTCAAGAAGTTGTCAATGTCTATTTCGGATCAGAAAGCAGCTGCAAAAGAGCTCCGGCTATTAACAAAGCGAATGCCCTCATTTCGAATCCTTTTTAATGAGTCCAATGATGTGATATTACAGTTGCTCAGTCCATTGTCACCCGGTACGGCTTATATCCCTCCTGACCTTCACGAGGACTTGATCACTACTGTTCTAAATCTCTCAATTCATGATGATAATAAGAAAATGTTTGCTGAGAATCCCACGGTCATCCCCCTGCTGATTGAGTCCTTAAAATTTGGAACCATCCAAACAAGAAGTAATGCTGCGGCAGCTATTTTCACATTATCTGCACTTGATTCCAACAAGAGCATCATTGGAAATTCTGGGGCCATCACACATTTAATTGAGCTTTTGGAGGAGGGACATCCATTGGCCATGAAAGATGCTGCCTCTGCGATATTCAACCTATGTTTGGTGCACGAAAATAAAGGAAGGACTGTTCGAGAAGGAGCTGTCCCAGTTATCCTGAACAAGATCATGGACCGTGTTCTAGTCGATGAGTTGTTGGCTATTCTGGCACTCCTATCTAGCCATCCAAAGGCTATTGAAGAAATGAGCGATATTGGTGCTGTCCCCTTGTTGCTCAGTATTATACGGGAGAGCACATCCGAAAGCTGCAAGGAAAATTGTGTCGCAATCCTACACACGATCTGCTTTTCTGATAGAACAAAATGGAAGGAAATTAGAGAAGAAGAAAAAGCCAAGGGCACACTTTCCGAACTCGCACAATGTGGGACTTCAAGGGCCAAAAGGAAGGCTAATGGGATTCTTCAGAGGCTCAGTAGATCTGCCACCTTAACACACACGGCTTAG 1371 0.45 MAKTGVFENDSTLLPHAKALDLKHQMRGLVNIILDADDFPLAALDEAITTLSALKDLKCKSTGSFPHKFHHLSVPPEFRCPISLELMSDPVILATGQTYDRPFIQRWLNEGHRTCPQTQQVLSHSILTPNHLVRDMISHWCKENGVELPKPVWDIDEEVITGADRSHLNSLLKKLSMSISDQKAAAKELRLLTKRMPSFRILFNESNDVILQLLSPLSPGTAYIPPDLHEDLITTVLNLSIHDDNKKMFAENPTVIPLLIESLKFGTIQTRSNAAAAIFTLSALDSNKSIIGNSGAITHLIELLEEGHPLAMKDAASAIFNLCLVHENKGRTVREGAVPVILNKIMDRVLVDELLAILALLSSHPKAIEEMSDIGAVPLLLSIIRESTSESCKENCVAILHTICFSDRTKWKEIREEEKAKGTLSELAQCGTSRAKRKANGILQRLSRSATLTHTA 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0032 456 Gene3D - 167 454 IPR011989 -
Lele07g0032 456 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 147 IPR013083 -
Lele07g0032 456 FunFam RING-type E3 ubiquitin transferase 73 147 - -
Lele07g0032 456 SMART Ubox_2 77 140 IPR003613 GO:0004842|GO:0016567
Lele07g0032 456 PANTHER U BOX DOMAIN-CONTAINING 39 446 - -
Lele07g0032 456 Pfam U-box domain 74 144 IPR003613 GO:0004842|GO:0016567
Lele07g0032 456 CDD RING-Ubox_PUB 78 120 IPR045210 -
Lele07g0032 456 SUPERFAMILY RING/U-box 69 151 - -
Lele07g0032 456 SUPERFAMILY ARM repeat 178 448 IPR016024 -
Lele07g0032 456 SMART arm_5 284 324 IPR000225 GO:0005515
Lele07g0032 456 SMART arm_5 242 283 IPR000225 GO:0005515
Lele07g0032 456 SMART arm_5 364 405 IPR000225 GO:0005515
Lele07g0032 456 FunFam RING-type E3 ubiquitin transferase 158 452 - -
Lele07g0032 456 ProSiteProfiles U-box domain profile. 73 147 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0032 Lele-ChrLele07 212948 215029 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0032 136 456 U-box Gene Family AT3G07360 59.451 1.05e-125 366