Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0028 ATGATTGCTAGGGCAGGCGATGAGCTGGTGATGGTGAGCAGAGAATATCCATGGATGGCCGATACTCACAAGGAGAGCCCCCTAGGCAAGCCAGCGTATATGTGCGGGAGACCAAGTTTGGGGACCTGTCAAAGCTTCCGTCGGCCGGTTGCAGCTCAATGCGCCCTCAATCTCAGCGCATATCCCTACGTGGGATACCAGGAGTGCGGTGGCGTTCAGGATCAGATGGATCAATGGGACGGCTTCCCTAACACCCTCTGCTGCCGCAATGCCCTCACCGTCTTCTCACAAGCTTTGGCCCTGCAAGCCCGCAACTCCAACAAGCAGGCCGCCCTCTTTATTCCCAACACTCAATGGGACGCCTGTTCCAACGCCTTTTACCTCCGACAGGGCATTTCTCCCGATTCATGCGGCTTCCACAGCTTGTACCTCGGCGCCTCCAAATGCTCCAACCTCGAACTCCCCGACATTCAGGGCCAGCAGTTCTACCAAACCGCCCTCGACCAATGCGCCCACTTCGACCGTCCCTCTCCAAATTCTTGTGCCGGCTGCGTCTCTGCCGTCTTGAATATCAGAGACTCTCTCTATGACCAATTAGTCGGCAGTCAGGACATTCCCCTCGAAAGAGCCGTTTGCGGCGTGGCCGCTCTCGTTTCCCTTGCCGCCGGCAAACCCGACGATCCTTCCCTTTCCGACAAGTTCTTGCGTTGCTGGCCTCCTCCCCCCAACAACGGTAGTCACCCTGCAGGCTTCCTCAAATGGTTCCTCATAGTTGCGCTGTTAGCGGTGATTGCGATGGCCTTGACGGCGATACTGGTGAGATTCGTGTGGCAGAAGAGGCCCCCCAAAGCCGCGGCGTTGAAAGAAATAACGACGTGGTCGGGGATGTACTGGTTCTCGAAGGCGGAGATAGAGAACGCGATAAACCACGGGAACGAGAGGAAGTGCCTGGGAAGAGGGAGTGCGGGAAAGGTGTTCAAAGGGGTTCTTCCCAGCGGTCAAGTGGTGGCCATCAAGCACCTCAACAGAACCAACAGCTCCGATTCTTTCACTCGCGAAGTGGAAGGCCTTTCCAGGCTTCGCCATCCCAATCTGGTTTGCCTCTTTGGCTGTTGCATTGAAGGTGGAGAGAGATATCTAGTGTATGAGTACTGTGCAGAAGGCAATCTAGCGCAACATCTCTTGAGAAGGGACAGCCATTTGACATGGGAAACAAGAGTTAGGATTTTAAGGGACTGCTCCTTCGCTCTCAAATACCTGCACCATCATATTGAGGGCTGCGTAGTCCACAGAGATATCAAGCTCACAAACATACTGTTGACGGAGAATTTGCAAGCGAAACTGTCGGATTTTGGGTTGGCAAAGATGTTGGGGATGGAAGAGAGCAAAGTATTCACGGATGTAAGAGGAACCATAGGGTACATGGATCCGGAGTACATGAGCAATGCCAAGTTAACATGTGCCAGTGACGTCTATAGTTTTGGAATAGTTGCCTTGCAAATCCTATCGGGTCAGAAGGTGATAGAGTTAGATCTCGATGCCAGAGATCAACTCACTAGGAAGGCGAGAGACGTGAGCATGGGAAAGCGACCAATACCGGATTTCGAAGACCCCAGGCTGAAGGGACAAGTAAACATGGCAGACTTTGAGGCCATCTTACATATTGCAGTTCTGTGTGTCGCCAAATCAAGCAAAGGGCGCCCAACCGTTGAGGTTGTGTTCGAGGAATTGGATAAGGCCTATAAGAACACTCTTGCCCACTCGGCTAGTGCCATTTGCTTGCATTAA 1788 0.5296 MIARAGDELVMVSREYPWMADTHKESPLGKPAYMCGRPSLGTCQSFRRPVAAQCALNLSAYPYVGYQECGGVQDQMDQWDGFPNTLCCRNALTVFSQALALQARNSNKQAALFIPNTQWDACSNAFYLRQGISPDSCGFHSLYLGASKCSNLELPDIQGQQFYQTALDQCAHFDRPSPNSCAGCVSAVLNIRDSLYDQLVGSQDIPLERAVCGVAALVSLAAGKPDDPSLSDKFLRCWPPPPNNGSHPAGFLKWFLIVALLAVIAMALTAILVRFVWQKRPPKAAALKEITTWSGMYWFSKAEIENAINHGNERKCLGRGSAGKVFKGVLPSGQVVAIKHLNRTNSSDSFTREVEGLSRLRHPNLVCLFGCCIEGGERYLVYEYCAEGNLAQHLLRRDSHLTWETRVRILRDCSFALKYLHHHIEGCVVHRDIKLTNILLTENLQAKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSMGKRPIPDFEDPRLKGQVNMADFEAILHIAVLCVAKSSKGRPTVEVVFEELDKAYKNTLAHSASAICLH 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0028 595 Gene3D Phosphorylase Kinase; domain 1 284 384 - -
Lele07g0028 595 ProSiteProfiles Protein kinase domain profile. 311 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g0028 595 FunFam probable receptor-like protein kinase At5g59700 385 593 - -
Lele07g0028 595 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 179 579 - -
Lele07g0028 595 SMART serkin_6 311 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g0028 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Lele07g0028 595 FunFam Cysteine-rich receptor-like protein kinase 40 284 384 - -
Lele07g0028 595 Pfam Protein kinase domain 314 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g0028 595 Gene3D Transferase(Phosphotransferase) domain 1 386 591 - -
Lele07g0028 595 Pfam SPARK 51 195 IPR043891 -
Lele07g0028 595 SUPERFAMILY Protein kinase-like (PK-like) 290 577 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0028 Lele-ChrLele07 190148 193068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0028 257 591 Receptor kinase-like Gene Family AT5G48740 37.222 7.08e-56 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Lele07g0028 Pkinase 7.3e-45 CL0016