Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0027 ATGAATTGTTTCTCGTGTTTCACGTCCCAGAAAAGTAAGAAAAACCTTGCCGCTGGAGACCCTGAATCTGCACCCCAAGATCATGTCGCTTCTAAACCACCGGATAATGGAAACCAAGCTCAGGCCCCAACTATTCAGGCGCAGACGTTCACTTTCCGCGAGCTAGCAACAGCCACCAAGAATTTCAGGCAGGAATGCCTGTTGGGTGAAGGTGGATTTGGCAGAGTGTACAAGGGCACCATTCCGGCAACCGGCAAGGTGGTCGCTTTGAAGCAGTTGGACCGAAATGGGATGAATGGCGGCAAGGATTTTCTGACGGAGGTTGCAGTTTTGAGTCGCCTTAACCATGAAAACCTGGTGAATCTAGTCGGTTATTGTGCCGATGGGGACCAACGTCTTCTGGTGTATGAATATATGTCGGGGGGCTCTGTATATGATCGTCTTTTTGAGCCGGAGGAAGGCAAGTCTCCATTGGATTGGTTCAACAGAATGAAAATAGCGTCGGGAGCAGCTAGAGGACTGGAGTATTTGCATGACACGGCCAATCCACCAGTTGTTTACAGGGACTTGAAATCCTCGAATATCTTGCTGGACGACGATCTCAACCCCAAACTATCTGATTTTGGGCTCAACAAGCTTTCCGGGGGAGACAGGACAAATCTTATATCCCCCGGAGTTACGGGTACTTATGGCTACTCTGCTCCCGAGTATACCAGGACCGGACACCTCACCTTGAAATCAGACGTCTACGGTTTTGGAGTCGTGCTGCTGGAGCTCATCACCGGACGACGAGCCATTGATACTACCAAGCCCAATGAGGAGCAAAATCTAGTTTCATGGGCACAACCCTTATTCAGAAATCCAAAACAATTCCCAGAAATGGCGGATCCGCTCCTGAACAAGCATTTCCCGGAAAAGGATCTAAATCAAGCGGTAGCAGTGGCCGCCATGTGCCTCCAGGAGGAAGAAGGGGTGAGGCCTTTGATGAGTGACGTGGTAACTACTCTGAGTTTCCTGTCCATGGTTCCACCGGAGGTAATTCCGGCATCGGTGTCGCCAGCCACCTTGCCACCGCAGGATGATGGTTCCGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGTCGGATTCTGATGGGACGGGAAGCAGATCAAGCCGAAGAAGCAGTGCGAGTTGGGAGGAGGGAAGCGTGACATCCAGCAAGAAATCGCGAAATTTAGGCAAGAAGAAAAGTAGCTCCAGAGATTTAAAGCAGAAGAGCAGCAAGAAGGGTGGAGGAAAAGTGTCGAGCAGAAAGAGCAGTGGAAAATCATCAAGAAGCAGGAAGATGAGCACGGGATCGGAGGAAGGAGGAGGAGAGGGAATGCACGAGAGAGGGAGCAGCAGGATGTCCCAGAGAGATATGTCGTTTGGGGAAAGCATGGGCCGCAGCGGCGGCGGTGACGACAGCGACAAGGGCTCACCGGAAGGGGCCAACCAGCGGCTGCAGCACGCCCATACTGCCAAACAACGTCCCAAGAATGGCCATTGGGAACGACTGGCCGCTTCTAGCGCCAAAGTGTAA 1560 0.5212 MNCFSCFTSQKSKKNLAAGDPESAPQDHVASKPPDNGNQAQAPTIQAQTFTFRELATATKNFRQECLLGEGGFGRVYKGTIPATGKVVALKQLDRNGMNGGKDFLTEVAVLSRLNHENLVNLVGYCADGDQRLLVYEYMSGGSVYDRLFEPEEGKSPLDWFNRMKIASGAARGLEYLHDTANPPVVYRDLKSSNILLDDDLNPKLSDFGLNKLSGGDRTNLISPGVTGTYGYSAPEYTRTGHLTLKSDVYGFGVVLLELITGRRAIDTTKPNEEQNLVSWAQPLFRNPKQFPEMADPLLNKHFPEKDLNQAVAVAAMCLQEEEGVRPLMSDVVTTLSFLSMVPPEVIPASVSPATLPPQDDGSEEEEEEEEEESDSDGTGSRSSRRSSASWEEGSVTSSKKSRNLGKKKSSSRDLKQKSSKKGGGKVSSRKSSGKSSRSRKMSTGSEEGGGEGMHERGSSRMSQRDMSFGESMGRSGGGDDSDKGSPEGANQRLQHAHTAKQRPKNGHWERLAASSAKV 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0027 519 MobiDBLite consensus disorder prediction 381 401 - -
Lele07g0027 519 Gene3D Transferase(Phosphotransferase) domain 1 139 342 - -
Lele07g0027 519 CDD STKc_IRAK 68 336 - -
Lele07g0027 519 SMART serkin_6 62 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g0027 519 MobiDBLite consensus disorder prediction 348 519 - -
Lele07g0027 519 MobiDBLite consensus disorder prediction 360 376 - -
Lele07g0027 519 Gene3D Phosphorylase Kinase; domain 1 34 138 - -
Lele07g0027 519 ProSiteProfiles Protein kinase domain profile. 62 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g0027 519 FunFam probable serine/threonine-protein kinase RLCKVII 34 138 - -
Lele07g0027 519 MobiDBLite consensus disorder prediction 426 444 - -
Lele07g0027 519 PANTHER OS07G0668900 PROTEIN 3 342 - -
Lele07g0027 519 MobiDBLite consensus disorder prediction 10 43 - -
Lele07g0027 519 SUPERFAMILY Protein kinase-like (PK-like) 41 341 IPR011009 -
Lele07g0027 519 Pfam Protein kinase domain 64 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g0027 519 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
Lele07g0027 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Lele07g0027 519 FunFam Serine/threonine-protein kinase PBS1 139 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0027 Lele-ChrLele07 187336 189331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0027 1 404 Glycoside Hydrolase AT3G07070 57.583 1.38e-158 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele07g0027 Pkinase 5.7e-45 CL0016