Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0024 ATGAACGACTATAAAAAGGTTTTGTTTTCTTTTTTGGTTTTTGGAGGGGCATCTTGTGATTCTGGGCTCAGAGGGTCCGAGCACGCAGACCTGGATCCCTCTGTTCTTTCTCCTCGTCTTTCACCCCATCCCAATTCCCAATCAAGCGCAGGAGTCTCTAAGACTCACCGACCTTCCGATCCATTTTCATCTTGGTTTATGAGCTCGAAGGAGAGACCCACTCTTGGTGGTACGCGGATTAAGACCCGCAAACGGAATATTGCAGCGCCACTGGACCCTGCAGCATTTTCGGATGCAGTGGTCCAGATTTACTTGGATAATGCTGGTGATCTGGAACTTGTTGCTAAGAGCATTGAGTCCTCAGACCTTAACTTCTCAAGATACGGTGACACCTTTTTTGAGGTTGTTTTCACTGGGGGGCGTACGCAACCTGGAACTACCAAGCCTGATGAGGGGGAGCGCCATCCTTACTCTATAATTGAGTGTGAGCCAAAGCGTGAAGTCATATCACCATCTGTAATCTACATACAGAAGATTTTGCGGCGGAGGCCTTTTCTTATCAAGAATCTTGAAAATGTCATGCGAAAATTTCTACAGTCCTTGGAGCTTTTTGAGGAAAATGAAAGGAAAAAGCTGGCAATCTTCACAGCACTTGCATTCTCCCAGAAGTTATCTGGGCTCCCCCCAGAAACTGTGTTCCAGCCACTTCTCAAAGATAATCTTGTGGCCAAAGGGCTAGTTCTATCATTTATAACTGACTTCTTTAAGGAGTATCTGGTTGACAACAGCCTTGATGATCTCATATCAATTCTGAAGCGGGGAAAAGTGGAGGACAATCTATTGGACTTCTTTCCCCCCGCAAAAAGATCTAATGATGCTTTTGCCGATCATTTCAACAAGGAAGGACTGGCAGCCTTGGTGGAGTATAATGAGAAGAAAATCTTTGAGGTAAAACTTAAAGAGATGAAATCTGCTCTGACAACCCAGATAACAGAGGAAACTGATATATCTGAAGTCATCGAAACTGTGAAGCTACGGGTTAGAGATGCTAAGTTACCAGACATAGAGGTTGTGAGAGTTCTGTGGGATGTCTTAATGGATGCTGTTCAGTGGTCAGGGAAAAATCAGCAACAGAATGCAAATTCAGCCCTGCGTCAGGTAAAAACATGGGCGGAATTGTTGAATACTTTTTGCACCAGTGGGAAACTTGAGCTGGAACTGATGTACAAAGTACAGATGCAATGCTACGAGGATGCTAAACTGATGAAGCTCTTCCCTGAGATTATTAGGTCTCTTTATGACCAAGATGTGCTGGCAGAAGATACCATTCATCATTGGTTCCGGAAAGGAACGAACACCAAGGGAAGGCAAACCTTCGTGAAGGCCCTGGAACCTTTTGTTAAGTGGCTGGAGGAGGCTGAAGAGGAGGAATAG 1434 0.4491 MNDYKKVLFSFLVFGGASCDSGLRGSEHADLDPSVLSPRLSPHPNSQSSAGVSKTHRPSDPFSSWFMSSKERPTLGGTRIKTRKRNIAAPLDPAAFSDAVVQIYLDNAGDLELVAKSIESSDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGERHPYSIIECEPKREVISPSVIYIQKILRRRPFLIKNLENVMRKFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVAKGLVLSFITDFFKEYLVDNSLDDLISILKRGKVEDNLLDFFPPAKRSNDAFADHFNKEGLAALVEYNEKKIFEVKLKEMKSALTTQITEETDISEVIETVKLRVRDAKLPDIEVVRVLWDVLMDAVQWSGKNQQQNANSALRQVKTWAELLNTFCTSGKLELELMYKVQMQCYEDAKLMKLFPEIIRSLYDQDVLAEDTIHHWFRKGTNTKGRQTFVKALEPFVKWLEEAEEEE 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0024 477 Coils Coil 187 207 - -
Lele07g0024 477 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 68 477 - -
Lele07g0024 477 MobiDBLite consensus disorder prediction 28 70 - -
Lele07g0024 477 ProSiteProfiles W2 domain profile. 312 477 IPR003307 GO:0005515
Lele07g0024 477 SUPERFAMILY ARM repeat 319 474 IPR016024 -
Lele07g0024 477 MobiDBLite consensus disorder prediction 39 70 - -
Lele07g0024 477 Pfam eIF4-gamma/eIF5/eIF2-epsilon 404 477 IPR003307 GO:0005515
Lele07g0024 477 Gene3D - 309 477 - -
Lele07g0024 477 SMART 542_3 391 476 IPR003307 GO:0005515
Lele07g0024 477 FunFam ARM repeat superfamily protein 309 477 - -
Lele07g0024 477 CDD W2_eIF5C_like 282 470 IPR043510 -
Lele07g0024 477 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0024 Lele-ChrLele07 178566 183312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0024 366 473 Eukaryotic Initiation Factors Gene Family AT2G34970 31.818 8.00e-09 56.2