LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele07g0022	ATGGACCAAGACGAAAAGCTCATCGCTCTCTTCCCACAACCTCCGAATTGGGTCACAAAACTCATATTCCTCCAGGCCGATTTAATCTCCAACTGCTTTATTTATGTCTTTACCCCTTTCTCTGTTGCGTCCGAGTCCTACCGTCAAGCTGAGGAGCGCAGAGACAATGTTGAATCGGCAGTCCACCGAATCCCGTCCACCATCACCCTCTTGCTTAAGAGGTTTGGACTTGGCTTTCTCAGTGCTGCTTATGCGTGCATGGTTCTGTTATTGGTTCTCCTTATGGCCGTTGTGCTAGGTGTTGGATTGATTCATCTGTGGGCGGAGGAACCCGTGTTTGTGAGGGAAAAGTTGTATTTCGATTACACCGATGCTCAACCTACGGCTGTCTTCTCTTTCGACGGTGGACTTAGTAGTGGCCTTGAAGGCTATAGCAACAAGAAGCCGATAAGTGTTCCTATTGGCCATACATTTTACATTTCCTTGGTCCTCGTCATGCCCGAATCTTACTTCAACCGGGAGATTGGCGTCTTTCAGTTGAGCCTAGAAGTCCTATCGGTAAATGGGAATGTTATAGCGAAATCTAGCCAGCCGATCATGTTGCGGTACAGAAGCTTCCCGGTCCGACTGGCCAGGACATTAATAAGGGGCATGCCTCTGTTACTGGGAATATCTGATGAAACTCAGAAGACCAAAGTAGAAATGTTGAAGCACAAGGAGGACAATCGAAGAACCAAAGCAATCAAAGCCATTCTGCGTCCGAGAGCAGGGACATCATCTCTGCCGCAGATATATGAAGCCGAGATCGTAATGAACTCCCAGCTGCCTGGGGCTAAACAATTGGTTCACAGTTGGAAGTGGACATTTTACGTGTGGGTGTCCTTGTATATCTACATTGTGCTGCTCATGATTCTGCTGTGTTGCTGTAGGCCACTTACTTTTATGGTGACACCAGAGTACTTGAGGGAACATGGCGGCACAAGAGAAGTGAGGAGCGTAGAAGCGGAAGAATCGCAAATGAGGGAAGGAGATGGAAGGGAAGTATCAGAGTTGTTGAGAAAATTGCGAAGAAGCAGAAGCAAGAGAAAAGCGATGCTGACGCGGGGCGATGATGCCGTGATGGGAGCCATGGGGTCATCGGCTTCCAGCATAACCATGACTAGACAGGAAGTTGGAACGGTGGTGATTTTGGTTTTAGCTAAACATGATGCCGCAGAGTATCAGGGCTTTCGTGGATCGCCGGATAAACGGAGCATCGCAGAGAGAAGGGGGTTCAGCTCCGATGCCGCCAGAATCAGTACACCCCGCTTTCGCACCACTAGCCCATTGGCTTCTCCGGCAGCTCTTTCCCCCTGTGTCACTATACCCCCCGGTATTAGTCCTACCGCCTTGCTTGACTCTCCCATCATGCTTCCTAATTCTCAGGCAATGCCATCTCCCACCACTGGAACTTTTCTGCTGCCTCCTCTCACTCACCGAGGATCACTTCTCACTTCCGTCCCTCTCGATGCCGGCCCTGGCCTCGCTTCCTCTTCCAAATTCGAGCCCCAAATCAATTCCAATCCTCCTCCCGCCTCCTCTGTTCCCGAAATTCAGGTTTCTAACCACTGCATTGTAACAAAGGGAGGAATTTCAGATTGCTGGCCACTTGTGCCTGATCAAGCACCGCTGGATTTTTCAATTCCAGCAGAGTTTCCAAAAGTACATAAAATGGAAAGAGAAGTACATTCTTATGCTGATGTGAAAATTGTACAAGATGCAATTTATAAAGCTAACAATCTTGAGATACCAATGCATCGTTCTGAGGAAGTTGCTGACAAAGGCTTCCTACCCAAAAAGGCTAACAAGGATATGGGAAAGCATAATTTTATAGAAGAAGATGAGAGAGAGACATCCTATTTGATGGGAATGGTAAGGAGCTCAGAAGATGGATACAATTGGAGAAAATATGGACAGAAGCAGGTTAAAGGGAGTGAATATCCTAGAAGCTATTATAAATGTACCCATCCTAACTGTCAGGTCAAGAAAAAGGTGGAACGATTTCTTCATGGCCAAATAACTGAAATTATCTACAAGGGTACTCATAATCATGGGAAACCTCAACCTAGTCGCCGACCATCACTGGGATCAACACTTTCTACTGATGACATGTTAGACGCGGGTGAAGGTGGTTGGAGAAATTTTCATTCAGGGAGGAAGGATATAAAACAAAATTTGGATTGGAAGGGTGATAATCAGGAAAGGACGTCATCAACTTCTGCTGTAACCGAACTCTCAGATCTCGTATCAACTAACAAGGGTAAACCTATCAGTATGTTTGAGTCAGAGGACACCCCAGAGCTTTCTTCTACACTTGCTAGTAAAGATGGTGATGAAGATGGAGCAACTCAAGGAAGCATATCAGTTGAAGAGGATGGAAATTATGAAGAACCTGAGTCAAAAAGAAGGAAGAAAGAGAGCTGCTTGATTGAATCAAATTTTGCTTCTAGGGCCGTCCGTGAGCCCAGGTTAGTAGTCCAAATTGAGAGTGAAGTAGATATACTTGATGATGGTTATCGTTGGCGAAAGTATGGGCAGAAAGTTGTCAAAGGAAATCCAAACCCTAGTGCACAGATTGATAGACCCAAGAATGTGTGCTTCCTAATTGAACCAGATTCTTTAGCAAGGAACCCTGGTTGGAGCTACTACAAATGCACAAGTGCTGGATGCCTTGTGAGGAAACATGTGGAAAGGGCTTCACACGATCTAAAATTTGTATTCACGACTTATGTGGGGAAACACAACCATGAAGTGCCCACCGCTAGAAGCAACAATCAAATGAGCTCGAGTTGTGCCTGTGCAGCCAATACATTACCAAAGCCAGAAACTCGAGTTCTAAACACGGCACCTCATTTTGATAGGAAGCCTGAATTTAGCGGTTTTATTGGAGGTTTTGGTGATGCGATGAAATTCGGGTCTTCCTTCATATACCCTAAACCCTTGAGTAATAATACCTTGCCTTACGGCTCTTATGAAATGAGTTCTATGACCCCTGTGTTCCCTGAGTTCCCGATGAATCTTCCCTCATGTGCCAGTTTTCCTCCGGCTGGACTGAATCTCAATTGTCAGTTACTTCTTAAGTCTACCCCGAACGCCGGGGCGAGGTTTCGACGATTCGGGCGTATGGCTGGCATGGAGATTCACGAGCTTGGACTCCTCAAAGGGGACCTTAGGATGACGAGCGTCGTAATGAATCTGCATAGACTTTATATCAGGGGCTGTGGTTTTACAGTGGGGGCACTCAAACTTGGCGTGGCCACCCTTTTCCGAACAGGAGCGGTCAGCCAGACCGGCTTTGCCTCCGCCCCTATTGGTGGTGGCGGCGTCGATCTTGTCGGCGATCTCCTTGGATGTGTGCTTCTTGGGCTTGGGCTTCCCGGTCATGATATCGGTGGAGATAGCGGAATGCCTCCGACTTCCGTTGGTTCTTTGAAAATTGAATAG	3483	0.4697	MDQDEKLIALFPQPPNWVTKLIFLQADLISNCFIYVFTPFSVASESYRQAEERRDNVESAVHRIPSTITLLLKRFGLGFLSAAYACMVLLLVLLMAVVLGVGLIHLWAEEPVFVREKLYFDYTDAQPTAVFSFDGGLSSGLEGYSNKKPISVPIGHTFYISLVLVMPESYFNREIGVFQLSLEVLSVNGNVIAKSSQPIMLRYRSFPVRLARTLIRGMPLLLGISDETQKTKVEMLKHKEDNRRTKAIKAILRPRAGTSSLPQIYEAEIVMNSQLPGAKQLVHSWKWTFYVWVSLYIYIVLLMILLCCCRPLTFMVTPEYLREHGGTREVRSVEAEESQMREGDGREVSELLRKLRRSRSKRKAMLTRGDDAVMGAMGSSASSITMTRQEVGTVVILVLAKHDAAEYQGFRGSPDKRSIAERRGFSSDAARISTPRFRTTSPLASPAALSPCVTIPPGISPTALLDSPIMLPNSQAMPSPTTGTFLLPPLTHRGSLLTSVPLDAGPGLASSSKFEPQINSNPPPASSVPEIQVSNHCIVTKGGISDCWPLVPDQAPLDFSIPAEFPKVHKMEREVHSYADVKIVQDAIYKANNLEIPMHRSEEVADKGFLPKKANKDMGKHNFIEEDERETSYLMGMVRSSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERFLHGQITEIIYKGTHNHGKPQPSRRPSLGSTLSTDDMLDAGEGGWRNFHSGRKDIKQNLDWKGDNQERTSSTSAVTELSDLVSTNKGKPISMFESEDTPELSSTLASKDGDEDGATQGSISVEEDGNYEEPESKRRKKESCLIESNFASRAVREPRLVVQIESEVDILDDGYRWRKYGQKVVKGNPNPSAQIDRPKNVCFLIEPDSLARNPGWSYYKCTSAGCLVRKHVERASHDLKFVFTTYVGKHNHEVPTARSNNQMSSSCACAANTLPKPETRVLNTAPHFDRKPEFSGFIGGFGDAMKFGSSFIYPKPLSNNTLPYGSYEMSSMTPVFPEFPMNLPSCASFPPAGLNLNCQLLLKSTPNAGARFRRFGRMAGMEIHELGLLKGDLRMTSVVMNLHRLYIRGCGFTVGALKLGVATLFRTGAVSQTGFASAPIGGGGVDLVGDLLGCVLLGLGLPGHDIGGDSGMPPTSVGSLKIE	1160

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele07g0022	1160	MobiDBLite	consensus disorder prediction	700	714	-	-
	Lele07g0022	1160	ProSiteProfiles	WRKY domain profile.	642	700	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele07g0022	1160	MobiDBLite	consensus disorder prediction	744	785	-	-
	Lele07g0022	1160	MobiDBLite	consensus disorder prediction	726	743	-	-
	Lele07g0022	1160	SUPERFAMILY	WRKY DNA-binding domain	841	932	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele07g0022	1160	SUPERFAMILY	WRKY DNA-binding domain	639	700	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele07g0022	1160	SMART	WRKY_cls	641	699	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele07g0022	1160	SMART	WRKY_cls	848	931	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele07g0022	1160	Gene3D	WRKY domain	834	933	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele07g0022	1160	Gene3D	WRKY domain	633	701	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele07g0022	1160	PANTHER	BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN	10	382	IPR009617	GO:0019915
	Lele07g0022	1160	Pfam	WRKY DNA -binding domain	849	869	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele07g0022	1160	Pfam	WRKY DNA -binding domain	642	697	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele07g0022	1160	Pfam	WRKY DNA -binding domain	894	930	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele07g0022	1160	ProSiteProfiles	WRKY domain profile.	843	932	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele07g0022	1160	MobiDBLite	consensus disorder prediction	692	815	-	-
	Lele07g0022	1160	Pfam	Putative adipose-regulatory protein (Seipin)	91	297	IPR009617	GO:0019915
	Lele07g0022	1160	FunFam	WRKY transcription factor	629	701	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele07g0022	Lele-ChrLele07	161381	168616	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele07g0022	441	936	WRKY Transcription Factor Family	AT4G26640	38.370	6.50e-79	267

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Lele07g0022		Seipin	1.5e-39	No_clan