Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0004 ATGTGTGGCATGTTTGCTTATCTTAACTATAACGCCAACAGAGAAAGGAGGTATATCCTGCAGGTACTATTCAATGGCCTCAGGCGATTGGAATACCGTGGCTATGATTCCGCTGGCATCGCCATCGACTCATCACTTTCACTTGATCCAAACACTTCTCAATGCTCGTCAATTTCCATCACTCCTCCTCTTATCTTCCGTCTAGAGGGCAACATCGAGTCCCTTGTCAAATCCGTCTACCAAGAAGTTGCTGAAGTGGAATTAAATTTGGAGGAATCTTTCTCCATCCATGCTGGAATAGCACATACACGATGGGCGACTCACGGAGAGCCTTCTCCAAGGAATAGTCATCCTCAGAGCTCTGGCGCTGGAGATGAATTTTTGGTTGTCCACAATGGGGTTATTACTAATTACGAGGTTTTGAAGGAAACATTGATCCGGCATGGGTTCACATTTGAATCTGAAACGGACACAGAAGTCATTCCGAAACTTGCAAAACTTGTTTTCGATAAAGCAAATGAGGTAGAAGGCGACCAAGTTGTTACCTTCAGTCAAGTTGTTCTGGAAGTTATGAGGCATCTCGATGGAGCATATGCCCTTATTTTCAAAAGCCGACATTATCCAAATGAGTTAATTGCTTGCAAGCGGGGCAGCCCGCTACTCCTAGGTGTAAAAGAATTGACAGAAAATATGGTTGATGGTTCAGCATTTGAGGATAATAACTTTCTATCAAAAAATGGCCACCCCAAAGAGTTGTTTTTATCTAGTGATGCTAATGCTGTGGTAGAACATACAAAGAAGGTTTTGGTTATTGAGGACGGTGAAGTTGTTCACCTCAAGGATGGTGCAGTTTCAATTTTGAAGTTTGAAAATGATAAAGGAAAAAATGGTGGTTCCCTTTCTAGACCTGCCTCAAAAGAAATTCACGAGCAACCTGAATCTCTTACAACCACAATGAGGGGGAGGCTTAGTCGGGGAGGATCAAGTAAATTAAAAACCGTACTGCTGGGTGGATTGAAGGACCACCTTAAAACAATCCGACGGAGTAGAAGGATTGTTTTCATCGGTTGTGGTACCAGTTATAATGCAGCTTTGGCAGCTAGACCGATATTGGAAGAACTTTCTGGAATCCCTGTTACCATGGAAATTGCTAGTGATCTGTTGGATCGGCAAGTACCAATATACAGAGAAGATACTGCTGTTTTTGTTAGTCAATCTGGTGAAACTGCAGATACTTTACTTGCACTGCAATATGCTTTAGACAATGGTGCATTATGTGTTGGCATAACAAATACCGTTGGTAGTGCAATAGCAAGGAATACACATTGTGGTGTACATATAAATGCTGGTGCTGAGATAGGTGTGGCCAGTACCAAGGCTTACACAAGTCAAATAGTAGTGATGGCCATGTTAGCACTTGCAATTGGAGGTGACACAATTTCTAATCAAGCCAGAAGAGAAGCAATTATCGATGGTCTCTTGGACCTGCCAAATAAAGTCAGGGAGGTGTTGAAGAAAGACCAGGAGATGAAGGATCTGGCGAAGTTGTCAATGTCTGAGCAGTCTCTTCTTGTCTTTGGAAGAGGATTTAACTACGCAACAGCTCTGGAGGGAGCTTTGAAAGTAAAGGAAGTGGCTCTTAAGCACAGTGAAGGAATACTTGCTGGTGAAATGAAGCATGGTCCTTTGGCGTTGGTGGATGAAAATCTTCCAATTATTGTTTTAGCTACTCGTGATGCTTGCTTCAGCAAGCAGCAGTCTGTCATTCAGCAACTTCATGCTCGCAAAGGTCGTCTTATAGTTGAGTGTTCAAAAGGGGATGCTGCTTTGGTGTCTCCTGGTGAACCTTGTAGGGTAATTGAAGTTCCACCTGTTGAAGACTGTCTTCAACCTGTAATTAATATAATTCCATTACAGTTACTGGCATATCATCTAACCGTACTTAAAGGATTAAATGTTGACCAGCCTCGGAATCTCGCCAAGAGTGTCACCACCCAGTGA 2001 0.4278 MCGMFAYLNYNANRERRYILQVLFNGLRRLEYRGYDSAGIAIDSSLSLDPNTSQCSSISITPPLIFRLEGNIESLVKSVYQEVAEVELNLEESFSIHAGIAHTRWATHGEPSPRNSHPQSSGAGDEFLVVHNGVITNYEVLKETLIRHGFTFESETDTEVIPKLAKLVFDKANEVEGDQVVTFSQVVLEVMRHLDGAYALIFKSRHYPNELIACKRGSPLLLGVKELTENMVDGSAFEDNNFLSKNGHPKELFLSSDANAVVEHTKKVLVIEDGEVVHLKDGAVSILKFENDKGKNGGSLSRPASKEIHEQPESLTTTMRGRLSRGGSSKLKTVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSGIPVTMEIASDLLDRQVPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISNQARREAIIDGLLDLPNKVREVLKKDQEMKDLAKLSMSEQSLLVFGRGFNYATALEGALKVKEVALKHSEGILAGEMKHGPLALVDENLPIIVLATRDACFSKQQSVIQQLHARKGRLIVECSKGDAALVSPGEPCRVIEVPPVEDCLQPVINIIPLQLLAYHLTVLKGLNVDQPRNLAKSVTTQ 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0004 666 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 282 IPR017932 -
Lele07g0004 666 MobiDBLite consensus disorder prediction 310 324 - -
Lele07g0004 666 CDD SIS_GlmS_GlmD_2 508 664 IPR035490 -
Lele07g0004 666 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 666 - -
Lele07g0004 666 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 2 302 - -
Lele07g0004 666 Pfam SIS domain 520 648 IPR001347 GO:0097367|GO:1901135
Lele07g0004 666 Pfam SIS domain 346 473 IPR001347 GO:0097367|GO:1901135
Lele07g0004 666 Pfam Glutamine amidotransferase domain 97 213 - -
Lele07g0004 666 SUPERFAMILY SIS domain 303 665 IPR046348 GO:0097367|GO:1901135
Lele07g0004 666 MobiDBLite consensus disorder prediction 295 326 - -
Lele07g0004 666 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 298 IPR029055 -
Lele07g0004 666 ProSiteProfiles SIS domain profile. 513 656 IPR001347 GO:0097367|GO:1901135
Lele07g0004 666 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 301 516 - -
Lele07g0004 666 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 288 IPR029055 -
Lele07g0004 666 CDD SIS_GlmS_GlmD_1 351 476 IPR035466 -
Lele07g0004 666 Gene3D - 306 665 - -
Lele07g0004 666 Gene3D - 502 651 - -
Lele07g0004 666 CDD GFAT 2 279 - -
Lele07g0004 666 ProSiteProfiles SIS domain profile. 342 481 IPR001347 GO:0097367|GO:1901135
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0004 Lele-ChrLele07 39052 44908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0004 21 223 PRT Gene Family AT2G16570 24.155 2.20e-06 48.9