LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele06g2824	ATGGCACTTCGTGATCCTTGGTTGCCGATAATTCTATTTCTTCTTCTGGTATATGTTGTTCCCTCTAGTTCCTCCGGGGATTCCATCTCCGAATTGCTCCTCAAGTTTAGGGACTCCCTAGAGAACAACAATGCACTATCCAGTTGGAACCAATCTTCGCCTCCTTGTGTTGGCAGAAAAGCCAATTGGGTTGGCCTTCTTTGCACCGATGGCAAGGTTTGGGGCTTGAAACTTGAGAAAATGGGGCTCAAGGGGGTCATCGATGTGGAATCCCTTGGTGGCCTCCCTCATCTCCGAACCATAAGCCTGATGGGTAATGATTTTGATTCCACTTGGCCTGAGTTCTACAAGGTTGTTGATCTCAAGACCCTTTATCTTTCCGATAACAAGTTTTCAGGCATCATTCCTGATGATGCCTTTCTACATATGGGGCTGAAGAAAATTCATTTGTCAAACAATCAGTTTACCGGTCCCATCCCAACTTCTTTGTCTTCATTGTCTAACCTTAAGGAGGTAACGCTCCAGAACAACAAGTTCCAAGGTCCCATCCCTGACTTTAATCAACCCTTAAGCTCATTTAACGCAGCTAACAATCAGTTGGAGGGTGCAATTCCAACCAGCCTCAGTAAGATGGACGCCTCTTCTTTCTCTGGTAATGAAGGGTTATGTGGAGCCCCATTGGACGCATGCAAATCTTCCAGCTCAAAACGCGCCTCAGTGGGGAGTATTGTGGTTGTAGCCATAGTTGTAGGAGTGGCAGTGATTGTGATAATAGGAGTAATGTTGATGGTTCTTGGAAGAAAAAACAAAGCAATACGGACAGTGGAAAATCCAACAACATCAGGCTCTCAAAAGAAAGTAGGAAGCAATGAAGTAGATGATGCGGGTAGTCACCACTCAGTATCATCCCAAGCCTCCACTAGGTCTGGCAAAAGAGCAGCAGATAACTTGAAGTTGTCATTTGTGAGAGACGATAGAGAGAGGTTTGATTTACAAGAATTGTTGAAAGCATCAGCAGAGGTATTAGGGAGTGGGTGCTTCAGTTCTTCCTATAAAGCTGCGTTGTCTAGTGGTGCAATGATTGTGGTGAAGAGATTCAAGCAAATGAACAATGTAGGAAGGGATGAGTTCCACGAGCACATGAGAAGGATTGGAAGGCTATCACATCCTAACTTGCTCCCTCTCGTGGCTTACTATTACCGAAAGGAGGAGAAACTTTTGGTTACCGACTATGTCAAGCATGGCAGCTTGGCCGTTCGCCTCCACGGACACCAAGGGATAGGGCAACCATGCTTAGATTGGCCGACGAGGTTAAAGATCGTGAAGGGTACAGCAAAAGGTCTAGAATATCTGTACAAGGAGATGCCAAGCCTGATAGCACCCCACGGCCATCTGAAATCATCTAACGTGCTTTTGGGGGAATCCTTTGAGCCCCTGCTGAATGACTATGGGTTGGTCCCTGTGATAAACCAAGAGCTTGCTCAGGACACCATGGTGATATACAAATCTCCAGAGTATCTCCAAAATGGGAGGGTTACTAAGAAGACTGATGTATGGAGTCTGGGAATACTCATTCTTGAGCTTTTAACTGGAAAGTTCCCTTCTAGCTTTCTACAGCAAGGAAAAGGAAGCGAGGTGGGCATGGCTAATTGGGTTCATTCTATAGTCCCAGAAGAGTGGAATAGTGAAGTGTTTGACAAAGAAATGGGAGACGCCTCTTCCAGTCAAGCCCAGATGGCCAAACTATTAAAGATTGCTTTGGATTGTTGTGAAGGGGATGTCGACAAGAGATTAGATCTCAAAGAAGCTATTGAGAAAATTCATTCGGTGAAGGAGACCGACCATGATGACAAACAACTAAACTAG	1866	0.4528	MALRDPWLPIILFLLLVYVVPSSSSGDSISELLLKFRDSLENNNALSSWNQSSPPCVGRKANWVGLLCTDGKVWGLKLEKMGLKGVIDVESLGGLPHLRTISLMGNDFDSTWPEFYKVVDLKTLYLSDNKFSGIIPDDAFLHMGLKKIHLSNNQFTGPIPTSLSSLSNLKEVTLQNNKFQGPIPDFNQPLSSFNAANNQLEGAIPTSLSKMDASSFSGNEGLCGAPLDACKSSSSKRASVGSIVVVAIVVGVAVIVIIGVMLMVLGRKNKAIRTVENPTTSGSQKKVGSNEVDDAGSHHSVSSQASTRSGKRAADNLKLSFVRDDRERFDLQELLKASAEVLGSGCFSSSYKAALSSGAMIVVKRFKQMNNVGRDEFHEHMRRIGRLSHPNLLPLVAYYYRKEEKLLVTDYVKHGSLAVRLHGHQGIGQPCLDWPTRLKIVKGTAKGLEYLYKEMPSLIAPHGHLKSSNVLLGESFEPLLNDYGLVPVINQELAQDTMVIYKSPEYLQNGRVTKKTDVWSLGILILELLTGKFPSSFLQQGKGSEVGMANWVHSIVPEEWNSEVFDKEMGDASSSQAQMAKLLKIALDCCEGDVDKRLDLKEAIEKIHSVKETDHDDKQLN	621

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele06g2824	621	Pfam	Leucine rich repeat N-terminal domain	32	68	IPR013210	-
	Lele06g2824	621	Gene3D	Phosphorylase Kinase; domain 1	300	411	-	-
	Lele06g2824	621	Gene3D	Ribonuclease Inhibitor	190	230	IPR032675	-
	Lele06g2824	621	SUPERFAMILY	Protein kinase-like (PK-like)	340	608	IPR011009	-
	Lele06g2824	621	Pfam	Leucine rich repeat	121	179	IPR001611	GO:0005515
	Lele06g2824	621	MobiDBLite	consensus disorder prediction	276	311	-	-
	Lele06g2824	621	FunFam	pollen receptor-like kinase 1	305	411	-	-
	Lele06g2824	621	Pfam	Protein kinase domain	340	605	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele06g2824	621	SUPERFAMILY	L domain-like	59	218	-	-
	Lele06g2824	621	Gene3D	Ribonuclease Inhibitor	30	186	IPR032675	-
	Lele06g2824	621	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	89	183	-	-
	Lele06g2824	621	Gene3D	Transferase(Phosphotransferase) domain 1	412	620	-	-
	Lele06g2824	621	FunFam	Pollen receptor-like kinase 1	412	621	-	-
	Lele06g2824	621	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	12	614	-	-
	Lele06g2824	621	ProSiteProfiles	Protein kinase domain profile.	336	611	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele06g2824	Lele-ChrLele06	35816375	35819593	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele06g2824	11	617	Receptor kinase-like Gene Family	AT5G35390	53.662	0.0	646

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Lele06g2824		Pkinase	8.5e-29	CL0016