Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2819 ATGTCAAGAATGATTGCAGAGAAGAAGTTGGGTGCAGGACGTATGGTGGCTGTGGCTATTGAGAATAACAAGATAAGCCAGCACGCTGCAAAATGGGCAGTTGATAATCTTGTTCCCAAAGATCAATGTATTCTCCTACTCCATGTCAGACAAAGGACATCTTCCATTCCTACGACAAACGGAAATCTTGTAGCCATGGATTGCAACGATGACGTGGCAAAAGCATACAAGCAGCAGGTCGACAACGAATCGAGGGAGCTTTTTGCCTCATTCCGTGTTTTCTGCAATAGAAAAAGCGTACTTGAGCTTCTGGTACTTGGGGCATCATCAAGAAATGGCATTGTAAGAAGATTTAGGACAAGCGATGTCCCAAGCCTTGTGTCAAAAGGGGCACCTCCATTCTGCACTGTGTATATCATTTCCAAAGGAAAAATCTCATCTGTACGAGCTGCTTCTGCTCCACTACCAGCCAAACCTACACCTGCACCTCGTAACGCATTGCAGCAACAATCTTCCAAGAGCCCTGATGGGCCTGATCCACAACTCGTTCGCAGCCTCACGCCCCGCTCAGAGCAGTCCGCATATGGCACCTCCCCCCTACCGGCTGATCATGATGACATCAAGTCACCATTCACAGGAGGGGTTAGATCAAGCTATAAACCGTACGAACCCTCAATCCCCGACTCTGATATATCATTTGTGAGCAGTGGAAGCAGGCCAAGCACTGAGACCATGTTTCATTCAATGTATGCTGATCTCGAACCTGGAATGGCCCCTCGGCTTTCCAACGCTTCAGATTTTGATGGCAGAAGCTCTACTGAGTCATCCTACTCCGGGATTAGGTCAATTGACATGAATTATTCTCTGGGTGACTATTCATTTAGCTCGCAAGAAAGTGGGAAGTCATCCTCAAGATTGTCCCTGACGGATGATTTGGAAGCCGAGATGAGAAGATTGAAGCTCGAACTTAAGCAAACGATGGAAATGTACAGTTCAGCTTGCAAGGAAGCTCTTACAGCAAGGCAGAAGGCAATGGAACTTCAACGATGGAAATTCGAAGAGCAAAAGAAATTAGAAGAGGCAAGGATGACTGAAGAAGCAGCACTGGCACTTGCAGAGAGAGAGAAAGCAAAGTGTAGAGCCGCCATTGAGGCAGCAGAAGCATCCAAGAAAATTGCGGAACTGGAGGCACACAAAAGATTGAATGCAGAGATGAAAGCCCTGAATGAATCAGAGCAGAAAAAGAAGGTACTAGATACTTTTTCACAAGGTAGTGCCAGGTACAGAAGATATACTATTGAGGAGATCGAAGAAGCAACAAACTGTTTTGTGGACTCGCTCAAGATTGGGGAAGGAGGGTATGGGCCAGTATATAGGTGCGAACTAGATCTCACGCCAGTTGCAGTGAAAGTCCTAAGGCCAGATGCAGCTCAAGGAAGGTCACAGTTTCAGCAAGAGGTCGAAGTGTTGAGTTGCATTCGTCATCCAAACATGGTTCTCCTCTTGGGAGCATGCCCGGAGTATGGGTGCCTTGTGTATGAGTACATGGCTAATGGAAGTTTGGAGGACTGCCTCTTCCGAAAACGTAACACGCCACCTCTCCCCTGGCAGTTAAGATTTCGAATAGCGGCAGAGATCGCCACCGGCCTCCTTTTCCTTCATCAGACAAAACCAGAACCACTTGTTCACCGGGATTTAAAGCCTGCCAACATTCTGCTAGATCGTAACTTTGTGAGCAAGATCAGTGATGTGGGATTGGCCAGGCTCGTCCCTCCTTTGGTTGCAGACAGTGTAACTCAGTACCGCATGACATCAACTGCAGGAACTTTCTGCTATATTGACCCTGAGTACCAGCAAACGGGCATGCTCGGAATTAAATCTGACGTATACTCGCTGGGGATCATGCTCCTACAAATGATAACGGCAAAGCCCCCGATGGGTTTGACTCATCATGTTGGACGAGCCATAGAAAACGGGACTTTCTCGGAGATGCTTGACCCAGCTGTTGAAGACTGGCCGGTGGAGGAGGCCCTGCAGTTTGCCAAGCTTTCTCTGCAGTGTGCGGAAATGAGGAGAAAAGACAGACCTGATCTTAAAAAAGTCGTACTGCCTCAGCTCAATAAACTGAGAGACTTCGCCGAAGATAACATGCCCATGATGATCATGTTTGGACGTAGTGCAGGATTCACCCCAAATCGTACCAGCAGTCCCACAACCTCCACAGAGTTTTTGAATGATTCCCAGTCGCTTTCTGGCATCTCCGGATATGAAAGCCGCTCAAGCACGTCCTCGTTGGGGAGAATGTGA 2307 0.4781 MSRMIAEKKLGAGRMVAVAIENNKISQHAAKWAVDNLVPKDQCILLLHVRQRTSSIPTTNGNLVAMDCNDDVAKAYKQQVDNESRELFASFRVFCNRKSVLELLVLGASSRNGIVRRFRTSDVPSLVSKGAPPFCTVYIISKGKISSVRAASAPLPAKPTPAPRNALQQQSSKSPDGPDPQLVRSLTPRSEQSAYGTSPLPADHDDIKSPFTGGVRSSYKPYEPSIPDSDISFVSSGSRPSTETMFHSMYADLEPGMAPRLSNASDFDGRSSTESSYSGIRSIDMNYSLGDYSFSSQESGKSSSRLSLTDDLEAEMRRLKLELKQTMEMYSSACKEALTARQKAMELQRWKFEEQKKLEEARMTEEAALALAEREKAKCRAAIEAAEASKKIAELEAHKRLNAEMKALNESEQKKKVLDTFSQGSARYRRYTIEEIEEATNCFVDSLKIGEGGYGPVYRCELDLTPVAVKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFRKRNTPPLPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPLVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDVYSLGIMLLQMITAKPPMGLTHHVGRAIENGTFSEMLDPAVEDWPVEEALQFAKLSLQCAEMRRKDRPDLKKVVLPQLNKLRDFAEDNMPMMIMFGRSAGFTPNRTSSPTTSTEFLNDSQSLSGISGYESRSSTSSLGRM 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2819 768 MobiDBLite consensus disorder prediction 163 178 - -
Lele06g2819 768 SUPERFAMILY Protein kinase-like (PK-like) 425 702 IPR011009 -
Lele06g2819 768 Coils Coil 355 415 - -
Lele06g2819 768 Coils Coil 309 329 - -
Lele06g2819 768 ProSiteProfiles Protein kinase domain profile. 443 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2819 768 CDD STKc_IRAK 449 702 - -
Lele06g2819 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 561 573 IPR008271 GO:0004672|GO:0006468
Lele06g2819 768 SMART serkin_6 443 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2819 768 Pfam Protein kinase domain 446 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2819 768 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 415 515 - -
Lele06g2819 768 MobiDBLite consensus disorder prediction 729 768 - -
Lele06g2819 768 MobiDBLite consensus disorder prediction 152 238 - -
Lele06g2819 768 PANTHER OS02G0152300 PROTEIN 16 734 - -
Lele06g2819 768 Gene3D Phosphorylase Kinase; domain 1 394 515 - -
Lele06g2819 768 FunFam U-box domain-containing protein 51 516 716 - -
Lele06g2819 768 CDD STK_N 16 143 - -
Lele06g2819 768 Gene3D Transferase(Phosphotransferase) domain 1 516 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2819 Lele-ChrLele06 35743261 35746542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2819 6 740 Receptor kinase-like Gene Family AT1G78940 54.440 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele06g2819 Pkinase 6.7e-39 CL0016