Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2805 ATGGGGAGGAAATGCTCTCATTGTGGGAACATAGGCCACAATTCCAGGACGTGCTCATCTCTGAGAGGCGCTTTTGTAGGGCTTCGACTCTTCGGCGTTCAACTCGACATATCGTCTTCTTCTTGTGTTGCCGCCATCAAGAAAAGCTTTAGCGTGGACTCTCTGCCCTCTTCCTCATCTCCTTCTTCCTCTTTCTCTTCCTCCAGATTAGCCATCGACGACCACTCCGATAGAGTCTCCCTCGGCTATCTCTCCGACGGCCTCCTCGGTCGAGTCCAAGACAGGAAAAAAGGAGTTCCATGGACAGAAGAGGAGCACCGATCGTTCCTGGTAGGGCTGGAGAAGCTGGGAAAAGGAGACTGGAGAGGAATCTCTAGGAACTATGTCACCACAAGAACCCCTACTCAAGTTGCTAGCCATGCTCAGAAATACTTCCTTCGACTTGCAACCGTTCACAAGAAGAAGCGACGTGCTAGTCTTTTTGATATGGTTGGCAGAGGCAGTCAAGGTCCTCCTCCTCATCATCATCATCCTAAGGCGGCAGGCGAATCAGTGGAGACTATGGACACTGATTTGCACCTTCTTGGCCCTCAAATGGAAGCCAACAACAAGAAGAACAAATTATCAGATGATAACAAGCAAATACAAGAAATTAGCGATGATGATTATAATTCTCAACAAGTGTTGAAATCTTCCAATGCATCATCAGCATCACTTGATCTGGAGCTGAGTCTTGCAGCCCCCAATAACACTCTCCAGAAGCAAAATACCCTTCTTGGTCCAATCATCAGCGTCACTTGA 801 0.4806 MGRKCSHCGNIGHNSRTCSSLRGAFVGLRLFGVQLDISSSSCVAAIKKSFSVDSLPSSSSPSSSFSSSRLAIDDHSDRVSLGYLSDGLLGRVQDRKKGVPWTEEEHRSFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLATVHKKKRRASLFDMVGRGSQGPPPHHHHPKAAGESVETMDTDLHLLGPQMEANNKKNKLSDDNKQIQEISDDDYNSQQVLKSSNASSASLDLELSLAAPNNTLQKQNTLLGPIISVT 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2805 266 MobiDBLite consensus disorder prediction 165 184 - -
Lele06g2805 266 PANTHER TRANSCRIPTION FACTOR KUA1 3 224 - -
Lele06g2805 266 Pfam Myb-like DNA-binding domain 100 145 IPR001005 -
Lele06g2805 266 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 96 147 IPR006447 GO:0003677
Lele06g2805 266 FunFam transcription factor MYB1R1 99 150 - -
Lele06g2805 266 ProSiteProfiles SANT domain profile. 101 149 IPR017884 -
Lele06g2805 266 ProSiteProfiles Myb-like domain profile. 93 145 IPR001005 -
Lele06g2805 266 Coils Coil 198 221 - -
Lele06g2805 266 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Lele06g2805 266 SUPERFAMILY Homeodomain-like 94 149 IPR009057 -
Lele06g2805 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 149 IPR017930 -
Lele06g2805 266 Gene3D - 99 151 - -
Lele06g2805 266 CDD SANT 100 145 IPR001005 -
Lele06g2805 266 SMART sant 97 147 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2805 Lele-ChrLele06 35641024 35642097 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele06g2805 Myb_DNA-binding 4e-11 CL0123