Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele06g2796 | ATGTCGTCTGACTCTGATGCCACCTTCCCCAATTCGTCGTCATCTTCGACACCATTGCAAGTGGACGATCCCCAAATTCGAAGATTGTCTATGATTCTCCCTCTGCTTCTCAGTTTAGCGCGGCCTCGCCAGACCCCGGAATTCGATTCTGTTAGCCACCGTGGTCGAGTCCGGATCATCATAGTTGACCCTTCAGCTGGAGCCATGATCGTGATCGAAGGCTCCGGAGATCTTCAATCCGTGCTTCAAGGCCTATCAGGGAAGCCCGGAGTGCCGCCGGCTTCCAAAGATTCGATTCAGGCTATGCCCAGAGTGGTGGTGACGGAAGAAGGCGCGGATTGTCCGATCTGCTTGGAAGCTTACGAAGTGGGCGGCGAAGCTAGGGAAATGCCTTGCAAGCATAAATTCCACTGTGAGTGTATTGAGAAGTGGTTAGGGCTTCACGGGTCCTGCCCAATCTGCCGATATGCCATGCCGGCGGAGGAGGAAAACACCAGTATCACCATCATGGGCAGCGAGGGCGAGCAAGATGGTGGCGAGAGGAGTGAGAGCGGTGAGGGGTTGGTATCCGTGAGTGTATGGGTGAGGTCGCTGGAAGAAGATGAAGATGATGACGAAGAAGACGATGATCCGATGGAAGTGGATTCAGAGTCGGATCATGTAACCGGGGGATCCAATAGTGATTCACGAGAAGGGAATTCTGCAGGGGATGAGGACTCGTGGATGATGATGGATCACGAGGCACAAGACATGGAATTCTGA | 762 | 0.5354 | MSSDSDATFPNSSSSSTPLQVDDPQIRRLSMILPLLLSLARPRQTPEFDSVSHRGRVRIIIVDPSAGAMIVIEGSGDLQSVLQGLSGKPGVPPASKDSIQAMPRVVVTEEGADCPICLEAYEVGGEAREMPCKHKFHCECIEKWLGLHGSCPICRYAMPAEEENTSITIMGSEGEQDGGERSESGEGLVSVSVWVRSLEEDEDDDEEDDDPMEVDSESDHVTGGSNSDSREGNSAGDEDSWMMMDHEAQDMEF | 253 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele06g2796 | 253 | Pfam | Ring finger domain | 113 | 155 | IPR001841 | - | |
Lele06g2796 | 253 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 52 | 159 | - | - | |
Lele06g2796 | 253 | SUPERFAMILY | RING/U-box | 108 | 160 | - | - | |
Lele06g2796 | 253 | FunFam | E3 ubiquitin-protein ligase RNF181 | 83 | 161 | - | - | |
Lele06g2796 | 253 | ProSiteProfiles | Zinc finger RING-type profile. | 114 | 155 | IPR001841 | - | |
Lele06g2796 | 253 | SMART | ring_2 | 114 | 154 | IPR001841 | - | |
Lele06g2796 | 253 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Lele06g2796 | 253 | MobiDBLite | consensus disorder prediction | 198 | 215 | - | - | |
Lele06g2796 | 253 | MobiDBLite | consensus disorder prediction | 232 | 253 | - | - | |
Lele06g2796 | 253 | MobiDBLite | consensus disorder prediction | 171 | 253 | - | - | |
Lele06g2796 | 253 | CDD | RING-H2_PA-TM-RING | 113 | 155 | - | - | |
Lele06g2796 | 253 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 86 | 161 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele06g2796 | Lele-ChrLele06 | 35584234 | 35584995 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele06g2796 | 27 | 196 | C3H Transcription Factor Family | AT1G26800 | 41.279 | 8.20e-37 | 127 |