Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2788 ATGGGTCGATCACCATGCTGTGACAAGGTGGGCTTAAAGAAAGGACCTTGGACTCCCGAGGAGGATCAGAAACTCCTAGCTTATATTGAGGAACATGGCCATGGAAGCTGGCGAGCCTTGCCTGCAAAAGCTGGCCTCCAGAGGTGTGGCAAGAGCTGCAGACTGAGGTGGACCAATTATCTTAGGCCTGATATTAAAAGAGGAAAGTTCAGTTTACAAGAAGAGCAAACCATCATCCAGCTCCATGCTCTCCTAGGAAACAGGTGGTCGGCTATAGCGACGCACTTGCCAAAGAGAACAGATAATGAGATCAAGAACTACTGGAATACGCATCTGAAGAAAAGATTAAGCAAAATGGGAATTGACCCTGTCACCCACAAACCCAAGAATGACGCCCTTGTCCCTCACGGCGGCCAGTCCAAGACGGCGGCCAACCTTAGCCACATGGCTCAGTGGGAGAGTGCCAGGCTTGAAGCTGAAGCAAGGTTGGCCAGAGAATCCAAACTACGTTCATCACTATCATCATTTACATCTTCATCTTCTTCTGCTTCTGCCTCAACTTCTTCAGCTCATCCAGTTCTCATCAAGCCTTGGAATAATAATAATAATGGTTGCTGGCTAAATAAATCCACTGATCAAAGTGAGCTTGAATCTCCAAAGTCCACGCTAACTCTCTCTGAGAACGTTAACACCCCACCCATTATGCCTATGATAGAGTTCGTGGGCACTTCTTCTGATTCTTGTGAGGCTGCAGGAATGGTGAAAGAAGAAGCTGATCATTACCGAGATCAGTGGAATAATAATAATCACAGTAATGGTTTAGAGAATTCAATGTCTTTTGCGTTCCTTCCCAATATGGAAGCCCCATGGACATCGCTAGAGCCTCTTCTTAGGATTGGCACTGGTGGGGATGATGCTGTTGGTGAGGATCAGGGATTCACGAATCTGTTGCTTAATACAAACTCCGACGACCGGAGCTTGTCGGAGGAGGACGGCGGAGGAGGAGAGTCTAACAACTGGGATGGTAGTAGTGTCGGCGGCGGCGGTAGTGGCATATTGTGTGAAGATAATAAGAACTACTGGAACAGCATTCTTAATTTAGTTAACTCTAATTCGCCTTCTCATTCGCCCATGTTCTGA 1140 0.4702 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLSKMGIDPVTHKPKNDALVPHGGQSKTAANLSHMAQWESARLEAEARLARESKLRSSLSSFTSSSSSASASTSSAHPVLIKPWNNNNNGCWLNKSTDQSELESPKSTLTLSENVNTPPIMPMIEFVGTSSDSCEAAGMVKEEADHYRDQWNNNNHSNGLENSMSFAFLPNMEAPWTSLEPLLRIGTGGDDAVGEDQGFTNLLLNTNSDDRSLSEEDGGGGESNNWDGSSVGGGGSGILCEDNKNYWNSILNLVNSNSPSHSPMF 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2788 379 MobiDBLite consensus disorder prediction 121 140 - -
Lele06g2788 379 MobiDBLite consensus disorder prediction 209 230 - -
Lele06g2788 379 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele06g2788 379 Gene3D - 68 134 - -
Lele06g2788 379 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 231 - -
Lele06g2788 379 FunFam MYB-related transcription factor 13 66 - -
Lele06g2788 379 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele06g2788 379 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele06g2788 379 Gene3D - 13 66 - -
Lele06g2788 379 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele06g2788 379 MobiDBLite consensus disorder prediction 318 346 - -
Lele06g2788 379 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele06g2788 379 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele06g2788 379 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele06g2788 379 SMART sant 66 114 IPR001005 -
Lele06g2788 379 SMART sant 13 63 IPR001005 -
Lele06g2788 379 FunFam MYB transcription factor 69 116 - -
Lele06g2788 379 CDD SANT 16 61 IPR001005 -
Lele06g2788 379 MobiDBLite consensus disorder prediction 174 195 - -
Lele06g2788 379 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2788 Lele-ChrLele06 35524179 35526894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2788 1 379 MYB Transcription Factor Family AT3G01140 55.759 4.11e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele06g2788 Myb_DNA-binding 1.4e-15 CL0123