Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2787 ATGGAGATTCCCCCAGCTGGAGTAAGAAAAGGCAGGTGGTCTAAAGAAGAAGACGATCTCCTAAGAGCATGCATCCAACGTTATGGTGAAGGCAAGTGGCGCCTCGTTCCTCAAAGAGCTGGGTTGAATAGATGCCGGAAAAGTTGTAGGCTGAGGTGGATGAACTACTTAAAGCCAGACATCAAGAGAGGAAACTTTACTGAGGATGAAGCTGATATGATAATGAGGTTTCGTAGACTCTTGGGAAACAGATGGTCGCTGATTGCTGCGAGGTTTCCAGGAAGAACATCGAATGACGTGAAAAATTACTGGAACACCCACATACTTAAGAGGCTGCAGTGCTCTTCCTCTTCCTCGCAAGAAGCAACCTTGAAAACCCAGAAACTAATAAGGCCCCGACCCCTAAGTTTTCCCAGAAAGAGAAAGGGATTATTATTAGCTGATAAAAGCGATTGCAGAGACAAGCCTGTAATCGCCACTGATAGTGACAGTGGTGACGTGGCGGTGGCGGTGGCGGTGGCGGTCGGTGCAGATTCATCAGCAAAAGAATCAGAGAAGGAGAAGGAGTGGTGGCAAAGTTTGCTCGATGACGTCATCGTCAACAAAGGCAGTAATGAAGAAGGCAGCTTATGGCGTTTGGGCGGAGAGAAACATCAGGATAAGTTTCTGCAGCCTCAATTCTGGGACGAACACGACGAGCAACAACAATTCCATTTCTTTCAATGA 726 0.4725 MEIPPAGVRKGRWSKEEDDLLRACIQRYGEGKWRLVPQRAGLNRCRKSCRLRWMNYLKPDIKRGNFTEDEADMIMRFRRLLGNRWSLIAARFPGRTSNDVKNYWNTHILKRLQCSSSSSQEATLKTQKLIRPRPLSFPRKRKGLLLADKSDCRDKPVIATDSDSGDVAVAVAVAVGADSSAKESEKEKEWWQSLLDDVIVNKGSNEEGSLWRLGGEKHQDKFLQPQFWDEHDEQQQFHFFQ 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2787 241 FunFam Myb transcription factor 10 62 - -
Lele06g2787 241 Gene3D - 65 132 - -
Lele06g2787 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 61 IPR017930 -
Lele06g2787 241 Gene3D - 10 62 - -
Lele06g2787 241 Pfam Myb-like DNA-binding domain 63 107 IPR001005 -
Lele06g2787 241 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Lele06g2787 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 112 IPR017930 -
Lele06g2787 241 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 139 - -
Lele06g2787 241 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Lele06g2787 241 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Lele06g2787 241 SUPERFAMILY Homeodomain-like 7 104 IPR009057 -
Lele06g2787 241 CDD SANT 12 57 IPR001005 -
Lele06g2787 241 SMART sant 9 59 IPR001005 -
Lele06g2787 241 SMART sant 62 110 IPR001005 -
Lele06g2787 241 CDD SANT 65 108 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2787 Lele-ChrLele06 35518794 35520130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2787 5 206 MYB Transcription Factor Family AT1G66370 44.248 3.53e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele06g2787 Myb_DNA-binding 1e-15 CL0123