Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2782 ATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGATTGTTCATGCACCCTCACATTATACGACTTTATGAGGTCATTGAAACCCCAACGGACATATATGTTGTTATGGAGTATGTAAAATCCGGTGAACTCTTTGATTACATTGTGGAAAAGGGTAGGCTGCAAGAACGTGAAGCCCGCAATTTTTTCCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGAAATATGGTGGCTCATAGAGACCTTAAGCCAGAGAATTTACTTTTGGACTCCAAATGCAATGTCAAAATTGCTGATTTTGGTTTGAGCAATATCATGCGCGATGGTCACTTTCTTAAGACAAGTTGCGGAAGCCCAAACTATGCTGCTCCAGAGGTTATATCTGGAAAATTGTATGCTGGACCTGAAGTAGATGTCTGGAGTTGTGGCGTAATTTTATATGCTCTTCTCTGTGGTACCCTTCCTTTTGACGATGAGAACATTCCAAACCTTTTTAAGAAAATAAAGGGTGGGATTTATACTCTTCCTAGTCATCTATCACCTGGTGCTAGAGATTTGATACCAAGGATGCTTGTGGTTGATCCTATGAAGAGAATGACCATACCTGAGATTCGCCAACATCCATGGTTCCAAGCTCAACTCCCTCGTTATTTAGCTGTGCCTCCACCAGATACAATGCAACAAGCAAAAAAGATTGATGAGGAACTTCTTCAGGAAGTGGTTAACATGGGATTTGATAGGAATCAACTGGTTGAATCTCTCAGGAACCGGATACAAAATGAGGGTACTGTAGCATACTATTTGTTGTTGGACAATCGGTTCCATGTTTCCAGTGGCTATCTTGGAGCTGAATTCCAAGAGACAATGGATGCTGGTTTCAACCGTATTAATCCTAGTGGAGCTACTGCCCCAGTTGTTGGTCACCGCCTTCCAGGGTTTATGGATTATCCAGTAGCAGCATTAAGATCCCAGTTCCCTGTTGAGAGAAAATGGGCGCTTGGGCTTCAGTCTCGTGCTCATCCTCGTGAAATAATGACCGAGGTCCTTAAAGCTCTGCAAGAATTAAATGTGTGTTGGAAAAAGATTGGACCTTACAACATGAAGTGCAGATGGGTTGCTGGCAATCCCGGTCATGACGGAATGGTAGACAATACTTGTGGTAGTCATTACTACAGAGATGATGCCACCATCATTGAGAACGATTCTGTTTCTAAGCCAAATGTGGTCAAGTTTGAACTTCAGCTTTACAAAACTCGGGAGGAGAAATATCTGCTCGATCTTCAACGGGTCCTGGGCCCACAGTTTCTGTTTTTGGATCTTTGTGCTGCTTTCCTTGCACAGCTTCGTGTGCTCTAA 1368 0.4254 MEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEREARNFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQAQLPRYLAVPPPDTMQQAKKIDEELLQEVVNMGFDRNQLVESLRNRIQNEGTVAYYLLLDNRFHVSSGYLGAEFQETMDAGFNRINPSGATAPVVGHRLPGFMDYPVAALRSQFPVERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGPYNMKCRWVAGNPGHDGMVDNTCGSHYYRDDATIIENDSVSKPNVVKFELQLYKTREEKYLLDLQRVLGPQFLFLDLCAAFLAQLRVL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2782 455 CDD AMPKA_C 332 452 - -
Lele06g2782 455 FunFam Non-specific serine/threonine protein kinase 43 226 - -
Lele06g2782 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 81 93 IPR008271 GO:0004672|GO:0006468
Lele06g2782 455 FunFam Non-specific serine/threonine protein kinase 338 453 - -
Lele06g2782 455 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 406 454 IPR001772 -
Lele06g2782 455 SUPERFAMILY Protein kinase-like (PK-like) 3 232 IPR011009 -
Lele06g2782 455 Gene3D Transferase(Phosphotransferase) domain 1 1 290 - -
Lele06g2782 455 CDD STKc_AMPK_alpha 1 214 - -
Lele06g2782 455 Pfam Kinase associated domain 1 412 454 IPR001772 -
Lele06g2782 455 SUPERFAMILY UBA-like 224 273 IPR009060 GO:0005515
Lele06g2782 455 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2782 455 SMART serkin_6 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2782 455 SUPERFAMILY KA1-like 271 454 IPR028375 -
Lele06g2782 455 Gene3D Kinase associated domain 1, KA1 338 453 - -
Lele06g2782 455 SMART uba_6 237 274 IPR015940 -
Lele06g2782 455 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 235 275 IPR015940 -
Lele06g2782 455 Pfam Protein kinase domain 3 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2782 455 CDD UBA_SnRK1_plant 236 276 - -
Lele06g2782 455 Pfam UBA/TS-N domain 236 272 IPR015940 -
Lele06g2782 455 PANTHER SERINE/THREONINE KINASE 6 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2782 Lele-ChrLele06 35486168 35490239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2782 2 214 CBL-interacting serine-threonine protein kinases AT4G24400 53.738 9.03e-80 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Lele06g2782 Pkinase 3.2e-69 CL0016