Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2778 ATGGGTTGCATTAACTCTAAGAAGGCCTTCGCCAGGGATTCGCCCGACCATGTCCGTCCGGTATTGGGAACCACCGATAAGAGGTCTTCTGTTGTGGCGGAGCCTCCATCGAGAGTCCAATCTGGGGTTCTGACTCTTGAGACCAAAGCGGAACAACCATCGGAGGATCGGATACAGGATGAGAAAAGGATTAAGAGGAACAGTTCTAAAGGAACTGGCTCTTTAAGAAGTTCGCATAGATTCGTGGAAGCCGAGCAGAATGCCGCCGGATGGCCCCCTTGGCTCACCTCTGCTGCAGGGGAAGCTATACAAGGATGGGTGCCTCTCAAGGCTGAGTCATTTGAGAAATTAGACAAGATTGGGCAAGGTACATATAGCAGTGTGTTCCGGGCACGGGAGGTTGCAAGTGGGAGGATGGTTGCCCTGAAGAAGGTACATATTGAGAACTTCCATCCTGAGAGCATTAGGTTCATGGCAAGAGAGATAGCAATCCTACGTAGGCTTGACCACCCAAACGTCATGAAATTGGAGGGTATCATTACATCACGTCTGTCAAGTAGCATATACCTTGTATTTGAATACATGGAACACGATCTCGCCGGCCTAGTTTCCTCTCCCGACATTAAGTTCAACGAGACTCAGGTTAAATGTTACATGAGGCAATTATTAAGTGGGCTTGAACACTGCCATCTCCATGGCATTATGCACCGTGACATTAAAACATCCAATATATTGGTAAATAATCAGGGTATTCTCAAGATAGGAGATTTTGGATTAGCAAATACCCTTAACAATAACAAGCATGCGTTGACGAGCTGTGTAGTGACTCTATGGTATCGTCCTCCTGAACTTTTGATGGGATCAACAAACTATGGAGTATCGGTGGATCTATGGAGTGTGGGCTGTGTATTTGCAGAACTTTTTCTGGGGAAGCCTCTTCTTAAGGGGAGAACTGAAGTTGAACAATTACACAAAATATTTAAACTTTGTGGCTCTCCACCTGATGAGTTCTGGAAAAAGTCTAAGCTTCCTCTTACAACAATGTTTAAACCTCAGAATCAGTATGAATGCACTCTAAGGGAGCAGTGTAGAGACCTCCCAGTTACGGCTGTAAACTTAATCGAGACTTTACTTTCCGTTGAGCCTAGTGGCCGTGGGACTGCCTCCTCTGCCCTAATGTCTGAGTATTTCAGCACCAAGCCGTATGCTTGTGATCCATCAATTCTGCCAAAGTATCCACCTCACAAAGAAATGGATGCCAGGAATTGGGAAGAAGCACATAGGAAAAAGGCTGGAGCTAAAGTGCAAGAGGCTGCAAAACCAAGAAAACAAAAGCGAGTCCATAAAATTTTGCAAGAACCAACTGATGTCAATCGTTCAGCTCCAAGAAAAGAGGAAGTGCATTACATCTCTCAAAACGCTCGTAAAGATGATGGAAAAATGTATCATCCTAAGGAAAAAGGAGGAGCTATGTATAGAGGCGCATCAAAGCCATCATCGAATGCGACGTCAGGGGCTACCCGTGTAATGGATGTATCTCATGGCTTTAGTGTGCAAATGCCAGTTTCAGGATCCAATGGCTATACATGGACCAAGAACAGAAAAGGAGATGCAACATCTACTTTATCAGATGGCTCAAAAAGCAAAATTAGTGCACTGGACCCTTCCTTTGCAAAAGGCACCTATGATTTAGCCAAACGAGGCACAGATGTATCAGAAAGAAAATATCATGACAAGACTTCCAACCATCAACAAAAGCATCAGATTCCACACGGCACACCAGACTCTCTCAGTGAAGCTGATGAATACAATTACATAGATATTGATCCGTCAGAACTAACAGATGTTGTGATAAATATTCAGGTAAGTGAAACATCTAAGGTAATTCTAAAGCACAAGGCTATTGAAGATGACTATTCCTTTCTGTGTATAACATCATTTCACTTTCTTTCCTGA 1956 0.4392 MGCINSKKAFARDSPDHVRPVLGTTDKRSSVVAEPPSRVQSGVLTLETKAEQPSEDRIQDEKRIKRNSSKGTGSLRSSHRFVEAEQNAAGWPPWLTSAAGEAIQGWVPLKAESFEKLDKIGQGTYSSVFRAREVASGRMVALKKVHIENFHPESIRFMAREIAILRRLDHPNVMKLEGIITSRLSSSIYLVFEYMEHDLAGLVSSPDIKFNETQVKCYMRQLLSGLEHCHLHGIMHRDIKTSNILVNNQGILKIGDFGLANTLNNNKHALTSCVVTLWYRPPELLMGSTNYGVSVDLWSVGCVFAELFLGKPLLKGRTEVEQLHKIFKLCGSPPDEFWKKSKLPLTTMFKPQNQYECTLREQCRDLPVTAVNLIETLLSVEPSGRGTASSALMSEYFSTKPYACDPSILPKYPPHKEMDARNWEEAHRKKAGAKVQEAAKPRKQKRVHKILQEPTDVNRSAPRKEEVHYISQNARKDDGKMYHPKEKGGAMYRGASKPSSNATSGATRVMDVSHGFSVQMPVSGSNGYTWTKNRKGDATSTLSDGSKSKISALDPSFAKGTYDLAKRGTDVSERKYHDKTSNHQQKHQIPHGTPDSLSEADEYNYIDIDPSELTDVVINIQVSETSKVILKHKAIEDDYSFLCITSFHFLS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2778 651 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524
Lele06g2778 651 FunFam probable serine/threonine-protein kinase At1g54610 101 196 - -
Lele06g2778 651 Gene3D Transferase(Phosphotransferase) domain 1 197 437 - -
Lele06g2778 651 MobiDBLite consensus disorder prediction 570 597 - -
Lele06g2778 651 SUPERFAMILY Protein kinase-like (PK-like) 109 403 IPR011009 -
Lele06g2778 651 FunFam probable serine/threonine-protein kinase At1g54610 197 437 - -
Lele06g2778 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Lele06g2778 651 MobiDBLite consensus disorder prediction 570 585 - -
Lele06g2778 651 MobiDBLite consensus disorder prediction 524 550 - -
Lele06g2778 651 MobiDBLite consensus disorder prediction 478 506 - -
Lele06g2778 651 MobiDBLite consensus disorder prediction 1 79 - -
Lele06g2778 651 SMART serkin_6 114 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2778 651 Pfam Protein kinase domain 114 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2778 651 MobiDBLite consensus disorder prediction 30 48 - -
Lele06g2778 651 ProSiteProfiles Protein kinase domain profile. 114 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele06g2778 651 CDD STKc_CDK9_like 114 397 - -
Lele06g2778 651 Gene3D Phosphorylase Kinase; domain 1 102 196 - -
Lele06g2778 651 PANTHER CELL DIVISION PROTEIN KINASE 112 401 - -
Lele06g2778 651 MobiDBLite consensus disorder prediction 50 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2778 Lele-ChrLele06 35463218 35466239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2778 106 452 Core Cell Cycle Gene Families AT5G10270 44.505 7.97e-101 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele06g2778 Pkinase 1.9e-68 CL0016