Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2776 ATGGCTTCGCCGCTTGCTCTTGGTGCCAGGCCTAGTTTCCTTCCGGAAAATTCCACCAACAATTCCTCCACTTCTGAGGATGGAGCAGAGAAGAATTTGGGTTTCAAGCAGAGTGCACCCATGAATTTGGTTGTTGCTCGTTCCCCAATGTTCCCCATCCCGCCTGGGCTTAGCCCTTCTGGTTTGCTTAATTCTCCGGGCTTCTTTTCGCCCCAGAGCCCCTTTGGGATATCCCACCAACAGGCTCTAGCACAGGTTACAGCTCAAGCTGTCCTAGCACAATCGCAAATGCATGCTCAAGCGGATTTTCACCCATCTGCAGTAACAGCCCCTTCTGAACCATTGGCCGTGCAGCCATCCAGTACTCCAGGTGAAGGATTAGAGCTACAAGTGGTACCATCGGTATCGGAACCTAAAGGTGCCCTAGTGGAAATATCGGAAATTTCTCATGCTGATAACAAATATCAAGCTTCTTCTAGGGGTGTTGACAAACCAGCGGATGATGGCTATAACTGGCGTAAGTATGGGCAGAAGCAGGTTAAGGGGAGTGACTATCCACGGAGCTACTACAAGTGTACACATCTGAACTGCCCTGTAAAGAAAAAGATTGAGCGTGCCCATGATGGCCACATAACTGAAATTATCTATAAAGGCCAGCATAACCATGAAAAGCCTCAGCCAAATAGGCGTGCTGCCAAAGATAATTGTGACTCAAATGAAAATAAAAGCATTCAAGTTATGTCTGAGTCAAATACACAGGTTTGGGTTGGAAATTCAAATGTGATAGGTGAAAGCATCCCTGACCATTCAATGCCTGAGGGTGACCAGACCTCCAATCAAGAGGCTCGCAGACAGTCATCTGGATCACGTGAGAGTGAGGAAGCACTTGATGCACATACTAAAGAAGAAGATGGAGATGTTGGTGAGCCAAAATCAAAAAGGAGGAGCACTGAGGTTGGAGCTACTGAAGCATCTTTGTCCCACAAGACTGTTACAGAACCTAAAATCATTGTACGGACAAGAAGCGAAGTTGATCTGTTAGATGATGGCTACAGGTGGCGCAAGTATGGGCAGAAAGTAGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAATGCACCTTTGCAGGATGTAATGTGCGTAAGCATGTTGAGAGATCTTCAACAGACCCTAAAGCTGTCATAAATACGTACGAGGGAAAACATAGCCATGATGTGCCTGCTTCTAGACATAGCAGCCACACCACCTCAGCTACTACCAATTCAATGCCTCAAACAACATAG 1284 0.465 MASPLALGARPSFLPENSTNNSSTSEDGAEKNLGFKQSAPMNLVVARSPMFPIPPGLSPSGLLNSPGFFSPQSPFGISHQQALAQVTAQAVLAQSQMHAQADFHPSAVTAPSEPLAVQPSSTPGEGLELQVVPSVSEPKGALVEISEISHADNKYQASSRGVDKPADDGYNWRKYGQKQVKGSDYPRSYYKCTHLNCPVKKKIERAHDGHITEIIYKGQHNHEKPQPNRRAAKDNCDSNENKSIQVMSESNTQVWVGNSNVIGESIPDHSMPEGDQTSNQEARRQSSGSRESEEALDAHTKEEDGDVGEPKSKRRSTEVGATEASLSHKTVTEPKIIVRTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTFAGCNVRKHVERSSTDPKAVINTYEGKHSHDVPASRHSSHTTSATTNSMPQTT 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2776 427 MobiDBLite consensus disorder prediction 262 328 - -
Lele06g2776 427 MobiDBLite consensus disorder prediction 1 35 - -
Lele06g2776 427 SMART WRKY_cls 166 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g2776 427 SMART WRKY_cls 347 406 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g2776 427 ProSiteProfiles WRKY domain profile. 167 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g2776 427 SUPERFAMILY WRKY DNA-binding domain 165 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele06g2776 427 FunFam WRKY transcription factor 154 226 - -
Lele06g2776 427 Gene3D WRKY domain 151 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele06g2776 427 Gene3D WRKY domain 332 408 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele06g2776 427 SUPERFAMILY WRKY DNA-binding domain 339 407 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele06g2776 427 MobiDBLite consensus disorder prediction 217 237 - -
Lele06g2776 427 MobiDBLite consensus disorder prediction 399 427 - -
Lele06g2776 427 MobiDBLite consensus disorder prediction 13 31 - -
Lele06g2776 427 MobiDBLite consensus disorder prediction 262 285 - -
Lele06g2776 427 ProSiteProfiles WRKY domain profile. 342 407 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g2776 427 MobiDBLite consensus disorder prediction 286 318 - -
Lele06g2776 427 Pfam WRKY DNA -binding domain 167 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g2776 427 Pfam WRKY DNA -binding domain 348 404 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele06g2776 427 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 421 IPR044810 GO:0003700
Lele06g2776 427 FunFam WRKY transcription factor 57 333 407 - -
Lele06g2776 427 MobiDBLite consensus disorder prediction 410 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2776 Lele-ChrLele06 35458820 35461302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2776 35 414 WRKY Transcription Factor Family AT2G03340 52.685 1.00e-120 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele06g2776 WRKY 5.4e-25 CL0274