Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2766 ATGGATGGGTGGATCGGTCGACAGCTCCTGGGAAATAATTCTATAAGCACCGGCGGCGACGCCGTAGATAACAACTTCATCGAGTGCTACGCTTGCACTCAGGTCGGCTTGCCTGTCTTCCACTCCACCAGCTGCGACGGCTATAACCAGCTCCAATGGGAGGCCTCCGCCGGTTCTTCCCTGATCCCCATCCAGAGCCGAACAGCCCACCGTTGCCAGACGACCAGGCCCAAATCGGGTCCGTTCGGGCAAGTTCTCGACCCGCGAAGCAAGCGCGTGCAGTCATGGAACAGAGCGTTTCTGATATCGCGTGGGATGGCGCTGGCCATCGACCCGTTGTTCTTCTACGCGCTGTCCATCGGCAGGGAAGGGAGGCCGTGTCTGTACATGGATGAACGGTTGGCGGCAACCGTGACGGTGCTTCGCACGTGCGTGGACGCGATGCACGTTTTCCACGTATGGCTTCAGTTGCGGATGGCTTACGTGTCGAAGGAATCGACGGTGGTTGGGTGCGGGAAGCTTGTATGGGATGCACGTGCCATAGCGGCGCATTACCTGGGTTCATTCAGGCGGTTCTGGTTCGATGCGTTCGTCATCTTCCCAATTCCGCAGGCTGTGTTTTGGTTAGTGCTGCCCAAATTAATAAGAGAAGAGCGAATCAAACTCATAATAACGATACTGCTATTAATCTTCCTGTTCCAGTTTCTGCCCAAGGTGTACCACAGCACCATCTTGATGAGAAGAATGAAAAAGGTCACCGGCTACATCTTTGGCACCATTTGGTGGGGATTTGGTCTCAATCTCATAGCTTACTTAATTGCTTCTCATGTTACTGGAGGGTGCTGGTATGTGCTGGCAATTCAACGTATTGCATCATGCCTGCAGAAGCAGTGTGAAAGTAGTCCTGGTTGTAATCTGTCTCTTTCATGCTCAGAGCAGGTATGCTACCAGTATCTGTTGGGAAAAAGCACACTAGAAAATCATCCATGTGCTGGAAACTCCACAGTTGTGAGAAAGACTTCGTGCTTCGATCTCGAAGGGCCTTTCAATTATGGCATCTACCAGTGGGCTCTTCCAGTCATATCCAGCAATTCCTTGGCTGTCAAGATTCTATATCCCATATTTTGGGGTTTGATGACCCTCAGCACCTTTGGCAACATTCTTGAACCTACAAGTCACTGGCTAGAAGTAATTTTCAGCATATGCATGGTACTAAGTGGATTACTGCTTTTCACTTTGTTGATTGGGAACATCCAGGTATTCCTACATGCAGTAATGGCAAAGAAGAGAAAGATGCAGCTGAGATGTCGTGACATGGAGTGGTGGATGAGGAGGAGGCAGCTGCCATCCCATTTGAGACACAGAGTTCGCCATTTTGAGCGTCTCAGATGGGCCGCCATGGGAGGAGAGGACGAAATGGAATTGATCAAGGACTTGCCTGAAGGTCTCAGGAGGGACATCAAGCGCTTTCTATGCTTAGACCTCATAAAAAAGGTACCTCTGTTCCACAACTTGGATGATCTTATTCTTGACAACATCTGTGACAGGGGTAAACCCTTAATCTTCTCTAAAGATGAAAAGATAATCAGAGAAGGAGACCCAGTGAGAAGGATGGTGTTCATTGTTCGAGGACGAATAAAACGCATCCAAAGCCTAAGCAAAGGCGTGATAGCGACCAGTAACCTTGAAGTAGGAGGCTTCCTGGGTGATGAGCTGCTGTCATGGTGCCTTCGCCGGCCGTTTGTAGACCGGCTTCCGGCATCCTCGGCTACATTTGTATGTGTTGAAGCAACAGAAGCATTTGGCCTGAGTGCTGAACACCTTAAGTACATTACTGATAACTTCCGCTACAAATTTGCTAATGAAAGACTCAAGAGAACAGCCAGATATTACTCATCCAATTGGCGAACCTGGGCTGCTGTTAACATCCAACTTGCTTGGCAAAATTACAGGAAGAGGAGTAAAGGTTCAGTGATTTCTGTAACTGATGAAAATGGAGTCACTGAACGCAGGCTAATGCAATATGCTGCAATGTTCATGTCAATAAGGCCACATGACCATCTTGAATAA 2070 0.4884 MDGWIGRQLLGNNSISTGGDAVDNNFIECYACTQVGLPVFHSTSCDGYNQLQWEASAGSSLIPIQSRTAHRCQTTRPKSGPFGQVLDPRSKRVQSWNRAFLISRGMALAIDPLFFYALSIGREGRPCLYMDERLAATVTVLRTCVDAMHVFHVWLQLRMAYVSKESTVVGCGKLVWDARAIAAHYLGSFRRFWFDAFVIFPIPQAVFWLVLPKLIREERIKLIITILLLIFLFQFLPKVYHSTILMRRMKKVTGYIFGTIWWGFGLNLIAYLIASHVTGGCWYVLAIQRIASCLQKQCESSPGCNLSLSCSEQVCYQYLLGKSTLENHPCAGNSTVVRKTSCFDLEGPFNYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNILEPTSHWLEVIFSICMVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSHLRHRVRHFERLRWAAMGGEDEMELIKDLPEGLRRDIKRFLCLDLIKKVPLFHNLDDLILDNICDRGKPLIFSKDEKIIREGDPVRRMVFIVRGRIKRIQSLSKGVIATSNLEVGGFLGDELLSWCLRRPFVDRLPASSATFVCVEATEAFGLSAEHLKYITDNFRYKFANERLKRTARYYSSNWRTWAAVNIQLAWQNYRKRSKGSVISVTDENGVTERRLMQYAAMFMSIRPHDHLE 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2766 689 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 78 658 - -
Lele06g2766 689 ProSiteProfiles cAMP/cGMP binding motif profile. 501 580 IPR000595 -
Lele06g2766 689 SMART cnmp_10 501 627 IPR000595 -
Lele06g2766 689 SUPERFAMILY Voltage-gated potassium channels 87 422 - -
Lele06g2766 689 Gene3D - 125 424 - -
Lele06g2766 689 Gene3D Jelly Rolls 499 617 IPR014710 -
Lele06g2766 689 SUPERFAMILY cAMP-binding domain-like 428 615 IPR018490 -
Lele06g2766 689 Pfam Ion transport protein 95 419 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele06g2766 689 CDD CAP_ED 501 608 IPR000595 -
Lele06g2766 689 Gene3D Helix hairpin bin 427 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2766 Lele-ChrLele06 35405672 35410393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2766 27 689 Ion Channels AT5G15410 75.111 0.0 989