Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2724 ATGAACCTCAACAGCGGCACCCTCGCCTTCACCTTTGGTATCATCTTTCTAATCCTATCCATCTTTTTGGCCTACCTCCGCCTTCGCCAGCTCTCCGGCAACCCCACTATATTCAACTTCCTTGCTCGTCCTCCTGGTTCCGCCGACGCCGGCGCCACCATACCAGTTGGCGCCGTCGTGGAGTTCCCCGACGTAGCAGAACGTGGGCTCGATGACTCCGCTATCAACACCTTCCCCAAGCTCTCCTACTCTGAGATGAAGAAAAGCTCTTATAACAATATTGAAGATCCTTCTAATAATTCTTCTTCTTGTTCCATCTGCTTAGCGGATTATATGGAAGACGACATGTTAAGATTGCTTTCTGATTGTGGCCATGTTTATCATCTTCGTTGCGTTGACCCATGGCTCAAGTTACACAACACTTGCCCTATCTGTCGAACTCGAATATCGTCCACTTTGTCTGTTAAAGCTCCCGATGATCGCTCAAATAACTCCGTCGATGGCCGGGATATAGTTTGA 519 0.4875 MNLNSGTLAFTFGIIFLILSIFLAYLRLRQLSGNPTIFNFLARPPGSADAGATIPVGAVVEFPDVAERGLDDSAINTFPKLSYSEMKKSSYNNIEDPSNNSSSCSICLADYMEDDMLRLLSDCGHVYHLRCVDPWLKLHNTCPICRTRISSTLSVKAPDDRSNNSVDGRDIV 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2724 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 152 IPR013083 -
Lele06g2724 172 SMART ring_2 104 145 IPR001841 -
Lele06g2724 172 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 152 IPR045899 -
Lele06g2724 172 SUPERFAMILY RING/U-box 103 153 - -
Lele06g2724 172 Pfam Ring finger domain 103 146 IPR001841 -
Lele06g2724 172 FunFam E3 ubiquitin-protein ligase ATL6 60 152 - -
Lele06g2724 172 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2724 Lele-ChrLele06 35062523 35063041 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2724 8 147 C3H Transcription Factor Family AT5G06490 36.486 4.68e-26 96.7