Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2693 ATGTCAAGAGAGGTGGTGAAACATTATGAGTACATTTCTGATGACACTAAAACAGCAACATCATTCAAGAAAAGGAAAGCAAATATCTTGAAAAAAACATTAGAACTTAGCATTCTTTGTAATATTGAGGTTGGGGCAATCGTTTACCGTGGCCCCTCTGATTCTAAACCAGATGTTTGGCCAGATCATGATGTGAAATTCCGTGTTCCGGCTACTTCAGTGTTAGAAGAATTGCAAGTTTTCAAAGAGAATGAGATGTTGACTGACCAATTTCACCAGTTCAGCGTAGATAATGTTCCTGCAGCTCCATCAACATCTGAAGAAGGATTGTGCATGCCATATGTTCCAACACCACCAACATCTGAAGGATTGGAGTACAGAGAATGCCAATCTAGATTGACATTGTATAGCGTTGCATATGCCATGTTGAGCGAATCTGTACAATCATTGGATATGGTTATGTTAGGGTCAGGTTTATGGGCTATTATTGAAGAGATTTTCTCAGGTATGTTTCCTGCAGTTCTGTCTTCAAAGCTATCAGTTCCAATGTGTTGTTTTGAAGGCTGTTAG 570 0.393 MSREVVKHYEYISDDTKTATSFKKRKANILKKTLELSILCNIEVGAIVYRGPSDSKPDVWPDHDVKFRVPATSVLEELQVFKENEMLTDQFHQFSVDNVPAAPSTSEEGLCMPYVPTPPTSEGLEYRECQSRLTLYSVAYAMLSESVQSLDMVMLGSGLWAIIEEIFSGMFPAVLSSKLSVPMCCFEGC 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2693 189 CDD MADS_SRF_like 10 84 IPR033897 GO:0000981|GO:0000987|GO:0045944
Lele06g2693 189 Gene3D - 14 99 IPR036879 GO:0003677|GO:0046983
Lele06g2693 189 ProSiteProfiles MADS-box domain profile. 8 49 IPR002100 GO:0003677|GO:0046983
Lele06g2693 189 SUPERFAMILY SRF-like 10 66 IPR036879 GO:0003677|GO:0046983
Lele06g2693 189 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 11 53 IPR002100 GO:0003677|GO:0046983
Lele06g2693 189 SMART madsneu2 1 62 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2693 Lele-ChrLele06 34758941 34760871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2693 11 61 Type I MADS-box Gene Family AT3G05860 45.098 2.24e-09 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Lele06g2693 SRF-TF 1.3e-11 No_clan