Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2668 ATGAAAAACTTGTATGACAAAAACCCTATTTGTTCTCTCTGGAAGCTAAACTCTGGTGGATTACTTATTTTCATTTATGCAGCTTCCATTGACAAAACTCCTAAATCTGCAAGTAACCCACATCCTCTAAAAAATCTGAGTAGTCAGCATAAAAAGAAAGTGGCTAGAAATTCACTTAAACTTGATTCTTCAAATCTTTTCCCAAGCTTGCACCCCACGGTCGGTACCCTCTCTAGCTCCCTATATATATACAAAGCTCAAAGGTTAAATCTTTGCCCAAAGGATCAACATATCAAGACCAAAACTTGCCTCAAATTTACAAAACCCTCAAATCCCAAGAATTTTCTGTCCGTGGAAGGATTGAAAGAAGCAAGAAAATCTCAAAAACAAGCAATGGCATCTATTGGAGCCAAGGTGTTTGATAAAAGTCCTCTGAGAAAAATCCCACTTTTAGAAAGCGGAATGCTCAAGAATGATTTCGGGGACACGTGCGATCAGTACTATGGGTTTAAGACAGAAGCAGGAAAATCGGCTGATTCGAGGATCCTGAGGTTGTTGGAATTCTTCAGGCATTTGTATTACCGAAGAGCAGAGACGTTTTGGAAGATTGTTCCTTCTGGGCTTCAAGACGAATTTGTGGAACAGTTGGACAAAATCGGAGCCTTGTTCTCTGGGATCAAATCGAAGCAGAAAGTGAACACGATTCAGAGAAGCTTGAGCGTTGGCCAACTGTCACTTGGTGGCAGCGGCGGTTCTGAATTGAAGTTGGATCGGTTTAAGGTGAGAACCGTTCGTGTAGATGATGACAACGTTGGTGACAGAGAAGATGACACCTGGGCTACTGCAAGACCTATTTCGTCGTTTACTGGGAATTGGTTGTCTGATTTCTTGAGACAATGGATGGCGTGGACGCTTATTTTGGGAGTGATGATATCTTCTGGGGTTAACTTGGTGATGACTGGGATTGGATTTGCGGTGAGCACTATGTTCATCGTTTTTGTTTGCACTAGACTCATCTGTGCTCGAATTCACTTAAATGCTTCTCGCCGATCCCTCTTTGTTGCTTCCAGATCCAATCTTAGTCTGCTGGAGCGGGGATCTCATGGTCTTGAACCCATAGCAGTAGCGAACTTTCCGACCAAGAAGTACAGTGATGGAAGCTTTGCTGCTGCAGAAAATTCTCAATGCGCAGTCTGTCTTTCGGAATACCAAGGCGAGGATGTACTGCGCATCCTCCCCTACTGTGGACACTTCTTCCATGCAACCTGCATAGACATATGGCTGCAGCAACATTCCACATGCCCTGTATGTCGAATCTCATTACGCAATTCATCCGAGAGAAAACACATAATGCAACCGTTGTTCAGCGCTGTTGTTCAATCTAATTATGGCATGGAATCTATTGAAGCTCATCCTTATCACTGTATGATGGCTAATAATGAGTTATTATCACCAAGGAACCATGATGACATACATGGCATTAACTCGCTGGTACGAGAGGATCGTTATGCAGCCGAAGGCGATGGAACGGTTGCTATAGAGAATGTGACCAATTTAAGTGATGGTGATGATCGGTCCATGAAAGATGCAGGAAAGAAGCATTTAGAGAGCCCATCAATCCCCTTAAGTTAA 1632 0.4314 MKNLYDKNPICSLWKLNSGGLLIFIYAASIDKTPKSASNPHPLKNLSSQHKKKVARNSLKLDSSNLFPSLHPTVGTLSSSLYIYKAQRLNLCPKDQHIKTKTCLKFTKPSNPKNFLSVEGLKEARKSQKQAMASIGAKVFDKSPLRKIPLLESGMLKNDFGDTCDQYYGFKTEAGKSADSRILRLLEFFRHLYYRRAETFWKIVPSGLQDEFVEQLDKIGALFSGIKSKQKVNTIQRSLSVGQLSLGGSGGSELKLDRFKVRTVRVDDDNVGDREDDTWATARPISSFTGNWLSDFLRQWMAWTLILGVMISSGVNLVMTGIGFAVSTMFIVFVCTRLICARIHLNASRRSLFVASRSNLSLLERGSHGLEPIAVANFPTKKYSDGSFAAAENSQCAVCLSEYQGEDVLRILPYCGHFFHATCIDIWLQQHSTCPVCRISLRNSSERKHIMQPLFSAVVQSNYGMESIEAHPYHCMMANNELLSPRNHDDIHGINSLVREDRYAAEGDGTVAIENVTNLSDGDDRSMKDAGKKHLESPSIPLS 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2668 543 MobiDBLite consensus disorder prediction 521 535 - -
Lele06g2668 543 PANTHER OS11G0150450 PROTEIN 310 485 - -
Lele06g2668 543 Pfam Ring finger domain 395 438 IPR001841 -
Lele06g2668 543 MobiDBLite consensus disorder prediction 518 543 - -
Lele06g2668 543 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 361 444 IPR013083 -
Lele06g2668 543 SUPERFAMILY RING/U-box 390 442 - -
Lele06g2668 543 FunFam E3 ubiquitin-protein ligase ATL6 359 444 - -
Lele06g2668 543 CDD RING-H2_PA-TM-RING 395 438 - -
Lele06g2668 543 ProSiteProfiles Zinc finger RING-type profile. 396 438 IPR001841 -
Lele06g2668 543 SMART ring_2 396 437 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2668 Lele-ChrLele06 34540191 34547683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2668 317 487 Rapid Response to Elicitors AT2G35000 31.217 4.70e-20 90.5