Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g2657 ATGGCTACTGAGGACTTCCCTCTTCTCGATACCCCCTCCCACAACTCCCACTCGCAATCTCTCCTCAACGCTCACACGCGCCCCTTCCCTTCCTCCTCTAGCCCCACCACTGGAGTTGCAGCTACCTCCGCCGATGTCGGCGACTCCTCCAACGCCGACTACTTCACTCAACCCTTTCCCGACCATGGCGAAGATTCCTCTGATCCGAACAAATCCGCGTCCGGAGCCTTGACCCCTAATTCGAAGCGTACTGCCGTCGACAGCTCCTATTACTATAACAAGAAGTCGAAATCCTCCGCTGCAGGTGGCGAAGGCAGCGCCGCTACGAGCTCTGAACCTGATTTAGGATCCGAAGCGGCCTACCGGGTCGACTACCGGAAGGATCGCGAGGAATGGAGTGACACGGCGATTGAGTGTCTCCTGGACGCTTACACAGAGAGACTGAACCAGCTGAATCGCGGAAATCTGCGCGGGCGCGACTGGGAGGAGGTGGCGAGAGCCGTTAGCGAGCTGTTCTCCGTTGGTGGTAGTGTCGATGGAAAGGACAAATCGTGTAAGAGTGTGGAGCAATGCAAGAACAAGATTGATAATTTGAAGAAGAGGTACAAGGTGGAGCTTCAGAGAATAAGTAGTGGCAGCATCACATCGAGTAACTGGCACTGGTTTAAAAAGATCAAAATTATTGTTGGGAACTCATTGACTGTGAAGACGGTGTCAGATGATGAGAAGGGTGGTGGTGGAGCTAATTCCTTGTCTGCAGCGAGACGCCCAAAGAACAGATATACACCCACCAATCTTGCAGTGTTGAATAACCCGAAAACAAAACCAGCGTCTAATCTCAAATGGCATAGAGTTCTGTTTAAAATCAGTGGATCTGCGTTAGCTGGAAACTGCCAAAGTATTGACCCCAAGGTGGTGGCAATGCAGATTGCTGGGGAAGTGGCGACAGCTTGCCGCCTTGGAGTTGAGGTTGCCATTGTTGTTGGTGGTCGTAACTTTTATGGCGATTCTTGGGTGTCTGCTACGGGGTTGGACAGACCTACGGCTTCAAAAATTGGTTATGCTTTTTGTGCTGACCATACCGTTATTGTCTGTAAAACAAGTATGATGGCTACGGTTATGAATTCTATTCTGCTTCATTCTGCTTTGGAGAAGCTGGGTATTCAGGCACGTGTTCAAAGTGCGTTCTCTGTGCCAGAGATTGCTGAACCTTATAACAGGCAACGAGCTATCCGACATCTCGAGAAAGGAAGGGTTGTCATACTTGGTGGTGTCGGTGCTGGCACAGGAAATCCTCTCTTTACCACTGATACAGCTGCAGCTCTTAGAGCTTCCGAGCTTAATGCAGATGTTATGGTGAAAGGAACCAATGTTAGTGGGGCCTATGATTGCCATGCTGGCAGTGAGAATGTGACACTTGATCACATTTCTTTTCGGGAAGTTGCTTCGAGGGGCATCACTTCCATAGATATGATGGCATTAGCATACTGTGAAGAGAATGGAATTCCAGTTGTAGTCTTCAGCATGCTTGAACCGGGGAATGTTTCAAGAGCACTATGTGGAGATCAGATTGGCACATTGATTGATCAAACAGGAAGTATTAATTAA 1608 0.4925 MATEDFPLLDTPSHNSHSQSLLNAHTRPFPSSSSPTTGVAATSADVGDSSNADYFTQPFPDHGEDSSDPNKSASGALTPNSKRTAVDSSYYYNKKSKSSAAGGEGSAATSSEPDLGSEAAYRVDYRKDREEWSDTAIECLLDAYTERLNQLNRGNLRGRDWEEVARAVSELFSVGGSVDGKDKSCKSVEQCKNKIDNLKKRYKVELQRISSGSITSSNWHWFKKIKIIVGNSLTVKTVSDDEKGGGGANSLSAARRPKNRYTPTNLAVLNNPKTKPASNLKWHRVLFKISGSALAGNCQSIDPKVVAMQIAGEVATACRLGVEVAIVVGGRNFYGDSWVSATGLDRPTASKIGYAFCADHTVIVCKTSMMATVMNSILLHSALEKLGIQARVQSAFSVPEIAEPYNRQRAIRHLEKGRVVILGGVGAGTGNPLFTTDTAAALRASELNADVMVKGTNVSGAYDCHAGSENVTLDHISFREVASRGITSIDMMALAYCEENGIPVVVFSMLEPGNVSRALCGDQIGTLIDQTGSIN 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g2657 535 MobiDBLite consensus disorder prediction 69 113 - -
Lele06g2657 535 FunFam Uridylate kinase isoform A 274 534 - -
Lele06g2657 535 Gene3D - 273 534 IPR036393 -
Lele06g2657 535 Coils Coil 181 208 - -
Lele06g2657 535 MobiDBLite consensus disorder prediction 1 116 - -
Lele06g2657 535 PANTHER URIDYLATE KINASE 125 534 - -
Lele06g2657 535 FunFam Aspartate/glutamate/uridylate kinase family protein 132 204 - -
Lele06g2657 535 Gene3D - 132 204 - -
Lele06g2657 535 SUPERFAMILY Carbamate kinase-like 281 528 IPR036393 -
Lele06g2657 535 MobiDBLite consensus disorder prediction 9 56 - -
Lele06g2657 535 Pfam Amino acid kinase family 284 508 IPR001048 -
Lele06g2657 535 CDD AAK_UMPK-PyrH-Ec 284 529 IPR015963 GO:0005737|GO:0006221|GO:0033862
Lele06g2657 535 Pfam Myb/SANT-like DNA-binding domain 129 225 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g2657 Lele-ChrLele06 34451985 34454982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g2657 132 239 Trihelix Transcription Factor Family AT3G14180 38.889 1.40e-15 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele06g2657 AA_kinase 4.9e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g2657 06 34451985 34454982 Lele07g2693 07 32462000 32464857 hybridization
Lele06g2657 06 34451985 34454982 Lele08g2596 08 31719565 31722589 hybridization